FastQCFastQC Report
Thu 27 Sep 2018
HMGFWBGX7_n02_ZmTARGET.0808-3357-CHX-02.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMGFWBGX7_n02_ZmTARGET.0808-3357-CHX-02.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146
Sequences flagged as poor quality0
Sequence length76
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGTTAAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCCGG21.36986301369863No Hit
AAGATCTCCCTGGGCTCGGCCGTCGTCACCACGTTCCCCGGCCTGAACGG10.684931506849315No Hit
TGCTTTTTAGCCTTTTACAAGATTTACAAAATGTCGATGTATAGTTGACA10.684931506849315No Hit
GTAATAATGCTGCAAATGGATCTACTGTGCATGAGCAAACTATACGGTCA10.684931506849315No Hit
GTTGACTCGAGTAGCAACTGCATCAGTGCTCCCGTCGACATATACTCCTC10.684931506849315No Hit
TGGGAAGCAACAGTCACCGATCTCTCTGCCTATGGAAAACTTTAAGTCGT10.684931506849315No Hit
GATTGGGGACGAATCATGGATGGTGGAGGTTGCGTGTGGGAGTTGCGCAT10.684931506849315No Hit
TGACATGATGTTGCCGATGAATACTGGTGCTGAAGGAGTTGAAACTGCTA10.684931506849315No Hit
CAAGTCTACTTTTGGGGACGTTTTCAAGGTGTTTTTTGCACTGATGCTGG10.684931506849315No Hit
GATGGCAACGTGCAGTTCGTCGCAGGCAATATGTTTGAGAGTATTCCACC10.684931506849315No Hit
ATATAAATGAAGAAGAATGACATAGTTGACAACTTGGGGTGTTCTTTGAG10.684931506849315No Hit
GGGGGGGGGGGGGGGGAGGGGGGGGGTGTGGTTGTGGATGATGAGGGTGG10.684931506849315No Hit
AGGCAGGTAGTTTGTGGACCGTCTGCAGAATAGAAAGCCGATGAGACTAG10.684931506849315No Hit
CCCATGGAGAGCAGCGAGTCCGGGAAAGCCGAGCCGGCGCCGGCGGTAGG10.684931506849315No Hit
CGATACCTACACAACAGGATTTCCTCAAGGCACTAACCAAGGGCAAGCTA10.684931506849315No Hit
ATCGGAACTATGATCTATTGGTTCAGCATAGTTTGCACATTGTCGGAGAA10.684931506849315No Hit
TTAATTCGTGGTAATCCTAGATATACTCAAATGACCCCCGAGGAAGTTAT10.684931506849315No Hit
GACCTCGAGACCCAGCGCTTCTCCCCGCTCACGGAGCTCCTCAGCCCGGG10.684931506849315No Hit
CTCAACCTGGTGCGCATGTGGGGGTTCTGCGCCAAAAAGGAGCAGCGGAT10.684931506849315No Hit
AAAAAAAAGGAACGTAAAATTAATCTGCTACTAGGAGAGGCACAAGTGCG10.684931506849315No Hit
AGGAGGCTGAACTGATGCGGGGAAACCCGTTGATTAATATCAACAATGCT10.684931506849315No Hit
CTCCTTCTACAGCGTGTTCGGCCACGGCCGCTACGCCCTCGACCTCTCCG10.684931506849315No Hit
TTCTTCTTGTTCTCAGGCAAAACGATCTGTAAAAAATAGAAAAGTAAACC10.684931506849315No Hit
TCTTGATCGGTGGTATCCCAATCGCCATGCCTACCGTGCTTTCAGTTACC10.684931506849315No Hit
GGGCGGCGGAGATTCGCGACCCGATGCTCCGCCGCCGCGTCTGGCTCGGT10.684931506849315No Hit
GAAGTTTTCATTGCAGTGGTTTGCCGCAGTACATGCTGCAGTGCCGTTCA10.684931506849315No Hit
CCACGACCGATCTGATAAAAGATAAGCTTGATAGACATAGGTGCAACGTA10.684931506849315No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGAGGAGAAGGGGGGG10.684931506849315No Hit
GCTTTCTGGAGTACTACTGAAACCGTGAATGTTGCTGATGGATCTAGTAT10.684931506849315No Hit
ATGGAAGCATGCTTAGAGGCTATAGACATTGGTGTCTATAAAGCCGCCAC10.684931506849315No Hit
CTCACCAACCAGGCAACCAAACCTTCTCCGATGGCCGCGCCCGTGTCGCA10.684931506849315No Hit
ATGATGGACGCGAGGCGACCGGCGTACTGGAGCAACAAGGCGGCCGCGCT10.684931506849315No Hit
CTCGTGTGCAGCGTGCTCGCCACCTCCTCTGTCGACACTCAGGGTACTGA10.684931506849315No Hit
AGGGGAGCGAGAACCCGCGCAGCTACTACAAGTGCAGCTTCCCGGGCTGC10.684931506849315No Hit
CGAAGATGAGAATGAGCTCGTCAGTTTCCCAGGATTCCCAACGCCGCTTG10.684931506849315No Hit
AACTGAGGCATGGTTCATAGATTCTTTCGAGGAGTGGCGCAAGGCCAAGA10.684931506849315No Hit
CTACCGGTGGCGCAAGTACGGCCAGAAGGCCGTCAAGAACAGCCCATACC10.684931506849315No Hit
GGAGATTAACTGTGATGGGTAGGAAATTAGGTGTTATTACCAGAACACGA10.684931506849315No Hit
CGGCGACGCACCAGCAAGCAATAATAGCTAATAACACCAACAGTAATGAC10.684931506849315No Hit
CGTAGAGTTGGGTGCTGGAGTGAGCAGCTTCAAACCAGGGGATAAGGTGA10.684931506849315No Hit
TAAACAGAACTGGCTATTCAAATAATAAATGATTAGAGTATATCCAGTTA10.684931506849315No Hit
GTTAAAGCTTGCTTTAACAGGAGCTGTTAAAGACTCGGTAGTTGGGGAAG10.684931506849315No Hit
TTTGAGATCAAGCGTCAGGAAATTTTGCAGGTTGCATAAATTTTAAGCAG10.684931506849315No Hit
TGGTGATCAGTCAATAACCCTCCAAAGGGAGATTGCAGGGGAGACAATTA10.684931506849315No Hit
CTTGGTCATCAGCCTGTTTACAATGCAAATCGGTATGCTAAACTTGTGAA10.684931506849315No Hit
CTGGAGTTCGACATGCGCCATTGCCAGGAGGTGTAGAGATTCGATGTACG10.684931506849315No Hit
CGCGTCCAAACATACAGCTAGATAGCCTCTGCATGCCTACGTACAGCATG10.684931506849315No Hit
TTTTCATCCGCCTTCGCCTCCAACCGCGTGCGCTCCACGCCTCCTCCAGG10.684931506849315No Hit
GGAGAAGAAGGCCGACCCCGCCGCCGAGAAGGAGAAGAAGGCGAGGAAGC10.684931506849315No Hit
ACGGCATTGAGGATTTCACAAGAAGTAATGCTCCTGGCTTGACACCATAT10.684931506849315No Hit
CGCCGGGCGCCGGGCACGGGCAACAGGAGCGGAAGCCGGTCATCATCTAC10.684931506849315No Hit
TGCATGCACATAATGAACAAACATACATGCAGGAAAATACCCATACTTAT10.684931506849315No Hit
ATCATCAAGCTGCAGTCGTGGGAAGACAAGTTCCGCAGCACGATCGAGTC10.684931506849315No Hit
CCTAACCCTAGCCGGTTACTGGTCATCACGACTGTTCATCATGTTACTAT10.684931506849315No Hit
TGAAGCTGAAGTGCCCACCTGCTGTGGTTGCTGTCCGAGCTGCCCTTGCG10.684931506849315No Hit
TTATTTCCTGCCATCTACTCCTCTTGGGTGTATTTGCTTCATTTTGTTCT10.684931506849315No Hit
GAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATA10.684931506849315No Hit
GGAGCCGCAGCCCACAGGATCAGGTGATGAGCCCACCACCTAAGGATAAC10.684931506849315No Hit
CAGTAGTTTCATTCCTGGGTATATATCAAAAGCAAATCAGCTCAGTGTGT10.684931506849315No Hit
ACTACAAGTGCACGTACCACAGCTGCTCCATGAAGAAGAAGGTGGAGAGG10.684931506849315No Hit
TAGGAGAGTCAAAATTATTGAAATCCACGGAAGACTTAAACCTTACCATT10.684931506849315No Hit
GGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTC10.684931506849315No Hit
GGCGAGGGCGAGGGCCGCCCCTACGAGGGCACCCAGACCGCCAAGCTGAA10.684931506849315No Hit
CAACGGGTGCCATCCGGAGTGCATGAACTGCGTCAAGGTCGGTGCAGGAA10.684931506849315No Hit
CGCATCTTCAAGGACCGCATCGGCCTCGGCGGCATCTTCCACAGCGCCGT10.684931506849315No Hit
AGCTCGCTGAGCGTATGCGCGGCGGCGCTGGCCGGGACCGGGACGGCCCC10.684931506849315No Hit
GGCAAATTCTGCTGAGTCTGTTTACTCCTTGATGGGTAACTTCTGCCCAC10.684931506849315No Hit
GATAGCCTCTGCATGCCTACGTACAGCATGGCCAAGGCCGAGCTGCTCCT10.684931506849315No Hit
AGGGTCTCACTGTGCAGCCCTGGCTAGAATGGAACTCGAGATGTAAACCA10.684931506849315No Hit
CTGCCGTCCAACCAAGAATTAGCAGCGATTGTGGTGAGGGAACAGCGGCG10.684931506849315No Hit
GGCTCGACGCAAACCTCCAGGATATGGAGAATCGAGTCAAGATCATGCTC10.684931506849315No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGTTGTTTGGGGGGGGG10.684931506849315No Hit
CGAGCGCCGGCCGAGGCAGACACAACCCGCAGCAACAACTTGCATCGGCA10.684931506849315No Hit
TTGCCCCGCCGCACCCGCTCCAGTCTACCATCCAATCGGTAAGGATTCGT10.684931506849315No Hit
CTACTAAACAACGTAGAATGGTTCGACCTAGGTGCGGCCGTTGTTGTCGG10.684931506849315No Hit
GAACGGGCAGCTCCCAGGCCCGGCCATCCATGCCCGCGAGGGAGACACTG10.684931506849315No Hit
CGGGTGGCCGTCCGGCGGCGGCGTCCAGGCCACGCCGGCCAACGCGAGGG10.684931506849315No Hit
CCGGCGGATGCCGTATCTCTTCTATGGCCGACCTACTCCTTCAAGCGCGG10.684931506849315No Hit
GAAACACCACGATCCAAGGAGGAACTCGTTTGACGACGCCGTCCGGGTAT10.684931506849315No Hit
ATCATCGTCATCGAGGACATCGACTGCTCCATCGACCTCACCGGCAAGCG10.684931506849315No Hit
GTTGGTCAATATGATCTCCACAATGCCGAGATGACCGTAAGAGAGACACT10.684931506849315No Hit
CGGTGTTCCACCAGCTGTACCACGTCCGGCGGCTGCACGACTACCACACG10.684931506849315No Hit
CACCATCCTTGGTGCCTGGCACTGGCAGCACCAGCGAGGGGTCTGCGCCC10.684931506849315No Hit
AGCGCCCCTGACAAGAAGCGTGTCCTATCTTCCAAAGCGTCGGGCGAGCC10.684931506849315No Hit
CACATCACTACCAAAATTATCCCTGGAGTCCTAAATGACCAGCCACATAC10.684931506849315No Hit
GCGGCACCAACTTCCCCTCCGACGGCCCCGTAATGCAGAAGAAGACCATG10.684931506849315No Hit
CGGAGGAGAGCGCGCGCGCGGATCCACCTCGATGTTGGCAAGACCATCAG10.684931506849315No Hit
GGGAGGTAGGTCAGTCTTCGGGCAGATCCGATGGTGTAACAGCAAGGCTC10.684931506849315No Hit
CGACGATGGAGCGGCTGCCGCCGCACCAGGAGAAGGCGGCGAGGCGGACC10.684931506849315No Hit
TATATTTACTAATTAAGAGCGAAGCGTTTTATGTAGCTCCTTGGCCATAC10.684931506849315No Hit
TGACTTATACATAACAAGTTGAACAGTTTTCTAACAAAACAGCTTCAAGC10.684931506849315No Hit
TGGGGCCTGTGAAAAAACTGAAGGCCAGGAATCTAACTCAGGGCCAGCCT10.684931506849315No Hit
TGGTCCTGTCAATCTTGCAACACTCCCTTCTAAAGACTTGTCTAGAGGTT10.684931506849315No Hit
TGGGCTGGGAGGCCTCCACCGAGCGGATGTACCCCGAGGACGGCGCCCTG10.684931506849315No Hit
CGGATGCTGTGCCGCGAACTGAAGTCTAAAACGACTCTCGGCAACGGATA10.684931506849315No Hit
CTACAAGGTGAAGCTGCGCGGCACCAACTTCCCCTCCGACGGCCCCGTAA10.684931506849315No Hit
AACAAACTTGGCATTCTTGCCTGTTCTTAATTATTGCCAGGACAGGAGAA10.684931506849315No Hit
CAGCAGCATGCCTCCGTGGTGAGTGAAGATCAGAACAGATACTTGTGTTG10.684931506849315No Hit
ATGAGGGGGCGCTCTCGATTGATGACATGGCAGGAGGAACATTCACTATC10.684931506849315No Hit
CAAATCTTATGGAGGTCATTGCTCTTTGGCAGAGCTTGAGGGAAAGCTAT10.684931506849315No Hit
CGCCGCCGCCTCCTCCTCCAACCCCACCACCACCCTGAGCAGCCCCCCCT10.684931506849315No Hit
CGGTGGCAGAGACGAGCACCTTCTCCAGTTTTTTTCTCAGTTCTCACTCC10.684931506849315No Hit
GGTGCGCGAGCATTGACGGAATCGATTACAGTGACATCGCACGGCAGCGG10.684931506849315No Hit
CATGATCAGAGGGCTGCTCACAGAGTGGCACTGGTACTGGATTTGTGTCG10.684931506849315No Hit
CCAGGGTCGCCGCGGTGGCGCCGTTCGACCGGTGCTACGACTCCACCAAG10.684931506849315No Hit
GTCTACGTCCCGCAGGATCCGATGGAGCTGGCGGAGCTGCATCCCCGGGT10.684931506849315No Hit
CAAGACCCTGCAAGCTCGGATACTCCAGTCTAAAAGTGACAACAAACTCT10.684931506849315No Hit
CCTCCTCTCCCCTCCCCCGGCTCTGTCTGTTGACTTACCCCGTCGAGCTT10.684931506849315No Hit
TTCTGGGACGAGGTTGCACGCATGCAAGAAGCACACGCGAGCTTGGACGA10.684931506849315No Hit
AGCTAAGCAAGTGCCAACCAACGAGTAGCAGGAAACATGTCTCCGCCCGT10.684931506849315No Hit
CCAAGGAGCATCCGATCGACGTGCCGATGGAGGTGGACGAGCACATGCTC10.684931506849315No Hit
GTTCTGCGTCGGGTCCGCGGCCTGGAGCTGCTACCACGAGTTCCTCGCCC10.684931506849315No Hit
CGGAAAGGCCACAGCTAGGGTTCGATACTTCGATCCCCACTCCATCTCCA10.684931506849315No Hit
GCAGAATAGAAGACCTACAACTACATCACCAGCTCCTACTTATCCCAATA10.684931506849315No Hit
CACCGCCAAGCCCACCGCCGCCTCCGCCGTCGGCCTCGCCGGCCCAGGCG10.684931506849315No Hit
GAGCCGCCGCAGCTAGCTGCGCTTTGAAGCATGGGTCGTTTTGAACAAGT10.684931506849315No Hit
CGCCGACCAAGGACTGACGGAACGGATCGGATGGATTGGGAGATTGGCAT10.684931506849315No Hit
CGCGAGCGACGCGTTCCAGGGCGACCTCCCGGGCCACCTCATGGCGTACC10.684931506849315No Hit
CTATTGCTAACTCTCCTCCAGGGGCATGGGCTCACTATAGTAGTCCAACA10.684931506849315No Hit
GACATCATTCTTCAGATCTAATCAAGTATTTTGAGTCACTTCATGGGGTC10.684931506849315No Hit
TGGAGAACTCTCGATTTAGCTCTAGTCCCCATTTTTAACTTGGTTATTTG10.684931506849315No Hit
GTCAACTATTTCCTGGACGGCCGGATGAACAAGGCGGAGATCCTCTTTCC10.684931506849315No Hit
CTGCCCTTCGCCTGGGACATCCTGTCCCCTCAGTTCCAGTACGGCTCCAA10.684931506849315No Hit
GTTTGGCAGGTTACAACGCCAGAAAGTTCGTGTTTCCCGTAACCGTATTC10.684931506849315No Hit
TGGACAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGA10.684931506849315No Hit
CTGCACCAGCAGCCTCACCATTTGCAAAGGCAGCATGATGCAGCTATTGA10.684931506849315No Hit
TGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGACTCCTCCCTG10.684931506849315No Hit
CGACGGGTTCAGAAACCTGAGATGCGCAAGGAAGCTGACGAGCGGGAGGC10.684931506849315No Hit
TTTATCTATAACAACTCATCGTGGCGCCTAAATTATTGTGTTGGTGGTGA10.684931506849315No Hit
AAAGAGTGGAACCAAATACGAGACAGTAGGAGAGCTCTGTGTCCTCCGTG10.684931506849315No Hit
GTGTGAGATCAGTAATGGAGGGTGCTGGCAGGAAACTAAAGATGGGAAAA10.684931506849315No Hit
GTTGATGCCTCTGCTAGCCCAGTTGAATGAGCATGTTAAGCTCTCCATGC10.684931506849315No Hit
CCTGTTCTTAATTATTGCCAGGACAGGAGAAACAAACAAAGATGAGGCCT10.684931506849315No Hit
GCCTACCTCGTGTTCGCCATGCAGCTCGGCTTCGCCATGCTGTGCGCCGG10.684931506849315No Hit
CTTTCGTTCTGCACAATCTTGCTGCTGATGCGACATGATGTATGATGTAA10.684931506849315No Hit
AGCTTGAGGACGGGCGCACGCTTGCTGACTACAACATCCAGAAGGAGAGC10.684931506849315No Hit
TCAAGATGAGGCTGAAGCTGAAGGACGGCGGCCACTACGACGCCGAGGTC10.684931506849315No Hit
TGGCAAGGCAATGGCACATTGTGACAAGGCTACAACTGTCTCTGATACAT10.684931506849315No Hit
GCAGGACCGAGAAATTATAAGGGTCATTGTTGACTGTTGTCTGCATGAGA10.684931506849315No Hit
CAGCCATACGGTGGATACAGGTGAGGAGGGGCTATGCAGTCCCCCACACC10.684931506849315No Hit
CTCGTGCCGTGCTGGGGCTTGCTCCACCTGTGCCGGCAAAATCGAGTCTG10.684931506849315No Hit
TGACAACACTGCTAGCGTTGCGACAAAGTTGGAAAATATGAAGCTAGGTT10.684931506849315No Hit
CGGCGGTCAGGAGGCCGTGCCTCGGCCGCCAGCGTCGTCGCAGCAGACGG10.684931506849315No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG10.684931506849315No Hit
GGGGGAGGGGCGGACCCCATGACGCCGGGGAGTACAAGCAGATGCCCGAC10.684931506849315No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers