Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HMCCLBGXK_n01_CMC_HAP1_1 HMCCLBGXK_n01_CMC_HAP1_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 183520202.0 0.0 76.0 41.0 22.69376913912776 76.0 pass pass pass pass warn pass pass pass fail pass pass HMCCLBGXK_n01_CMC_HAP1_2 HMCCLBGXK_n01_CMC_HAP1_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 273340190.0 0.0 76.0 41.0 23.824452824415218 76.0 pass pass pass pass warn pass pass pass fail pass pass HMCCLBGXK_n01_undetermined HMCCLBGXK_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 17409331.0 0.0 76.0 43.0 25.60844226438738 76.0 pass pass pass pass pass fail pass pass fail pass pass HMCCLBGXK_n02_CMC_HAP1_1 HMCCLBGXK_n02_CMC_HAP1_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 183520202.0 0.0 76.0 41.0 23.900567028905677 76.0 pass pass pass pass warn pass pass pass fail warn pass HMCCLBGXK_n02_CMC_HAP1_2 HMCCLBGXK_n02_CMC_HAP1_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 273340190.0 0.0 76.0 41.0 25.00006751211221 76.0 pass pass pass pass warn pass pass pass fail warn pass HMCCLBGXK_n02_undetermined HMCCLBGXK_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 17409331.0 0.0 76.0 44.0 26.2300967071413 76.0 pass pass pass pass pass fail pass pass fail warn pass