FastQCFastQC Report
Thu 14 Jul 2022
HM3L5DSX3_n02_CG_42.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHM3L5DSX3_n02_CG_42.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135092210
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA2859360.211659872911991No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG2084110.15427314424717756No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)