FastQCFastQC Report
Wed 13 Jul 2022
HM3L5DSX3_n01_CG_36.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHM3L5DSX3_n01_CG_36.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52298391
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA7781751.4879520863270919No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG2252090.4306231906828644No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC1588220.30368429499102567No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT647730.1238527586823847No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)