[2024-09-11 21:10:22,274] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-09-11 21:10:22,274] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-09-11 21:10:22,274] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-09-11 21:10:22,277] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-09-11 21:10:22,277] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-09-11 21:10:22,277] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-09-11 21:10:22,315] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-09-11 21:10:22,315] multiqc [INFO ] This is MultiQC v1.9 [2024-09-11 21:10:22,315] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-09-11 21:10:22,316] multiqc [DEBUG ] Working dir : /scratch/gencore/GENEFLOW/work/nf/00/d3e467c6c135b28fbff00551a80577/merged [2024-09-11 21:10:22,316] multiqc [INFO ] Template : default [2024-09-11 21:10:22,316] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-09-11 21:10:22,316] multiqc [INFO ] Searching : /scratch/gencore/GENEFLOW/work/nf/00/d3e467c6c135b28fbff00551a80577/merged [2024-09-11 21:10:22,316] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-09-11 21:10:22,316] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-50876299/tmpybiryl4z [2024-09-11 21:10:22,427] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_04_a_fastqc.html [2024-09-11 21:10:22,430] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_04_a_fastqc.html [2024-09-11 21:10:22,482] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_10_a_fastqc.html [2024-09-11 21:10:22,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_10_a_fastqc.html [2024-09-11 21:10:22,531] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_08_a_fastqc.html [2024-09-11 21:10:22,533] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_08_a_fastqc.html [2024-09-11 21:10:22,580] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_undetermined_fastqc.html [2024-09-11 21:10:22,582] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_undetermined_fastqc.html [2024-09-11 21:10:22,626] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_13_a_fastqc.html [2024-09-11 21:10:22,628] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_13_a_fastqc.html [2024-09-11 21:10:22,674] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_09_a_fastqc.html [2024-09-11 21:10:22,676] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_09_a_fastqc.html [2024-09-11 21:10:22,722] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_07_a_fastqc.html [2024-09-11 21:10:22,724] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_07_a_fastqc.html [2024-09-11 21:10:22,770] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_01_a_fastqc.html [2024-09-11 21:10:22,772] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_01_a_fastqc.html [2024-09-11 21:10:22,818] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_03_a_fastqc.html [2024-09-11 21:10:22,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_03_a_fastqc.html [2024-09-11 21:10:22,866] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_06_a_fastqc.html [2024-09-11 21:10:22,868] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_06_a_fastqc.html [2024-09-11 21:10:22,914] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_11_a_fastqc.html [2024-09-11 21:10:22,916] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_11_a_fastqc.html [2024-09-11 21:10:22,962] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_04_a_fastqc.html [2024-09-11 21:10:22,964] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_04_a_fastqc.html [2024-09-11 21:10:23,011] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_05_a_fastqc.html [2024-09-11 21:10:23,012] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_05_a_fastqc.html [2024-09-11 21:10:23,059] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_12_a_fastqc.html [2024-09-11 21:10:23,061] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_12_a_fastqc.html [2024-09-11 21:10:23,107] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_13_a_fastqc.html [2024-09-11 21:10:23,109] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_13_a_fastqc.html [2024-09-11 21:10:23,155] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_02_a_fastqc.html [2024-09-11 21:10:23,156] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_02_a_fastqc.html [2024-09-11 21:10:23,203] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_11_a_fastqc.html [2024-09-11 21:10:23,205] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_11_a_fastqc.html [2024-09-11 21:10:23,251] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_09_a_fastqc.html [2024-09-11 21:10:23,253] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_09_a_fastqc.html [2024-09-11 21:10:23,299] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_03_a_fastqc.html [2024-09-11 21:10:23,301] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_03_a_fastqc.html [2024-09-11 21:10:23,348] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_08_a_fastqc.html [2024-09-11 21:10:23,349] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_08_a_fastqc.html [2024-09-11 21:10:23,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_02_a_fastqc.html [2024-09-11 21:10:23,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_02_a_fastqc.html [2024-09-11 21:10:23,444] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_12_a_fastqc.html [2024-09-11 21:10:23,445] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_12_a_fastqc.html [2024-09-11 21:10:23,495] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_06_a_fastqc.html [2024-09-11 21:10:23,496] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_06_a_fastqc.html [2024-09-11 21:10:23,545] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_07_a_fastqc.html [2024-09-11 21:10:23,546] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_07_a_fastqc.html [2024-09-11 21:10:23,592] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_05_a_fastqc.html [2024-09-11 21:10:23,594] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n01_sr5965_3_05_a_fastqc.html [2024-09-11 21:10:23,640] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_01_a_fastqc.html [2024-09-11 21:10:23,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_01_a_fastqc.html [2024-09-11 21:10:23,689] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_10_a_fastqc.html [2024-09-11 21:10:23,690] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_sr5965_3_10_a_fastqc.html [2024-09-11 21:10:23,737] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLYNYDSXC_n02_undetermined_fastqc.html [2024-09-11 21:10:23,739] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLYNYDSXC_n02_undetermined_fastqc.html [2024-09-11 21:10:24,259] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-09-11 21:10:24,261] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-09-11 21:10:24,269] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-09-11 21:10:24,276] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 14 samples (table) [2024-09-11 21:10:24,286] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-09-11 21:10:24,292] multiqc [DEBUG ] No samples found: conpair [2024-09-11 21:10:24,298] multiqc [DEBUG ] No samples found: peddy [2024-09-11 21:10:24,305] multiqc [DEBUG ] No samples found: somalier [2024-09-11 21:10:24,311] multiqc [DEBUG ] No samples found: methylQA [2024-09-11 21:10:24,322] multiqc [DEBUG ] No samples found: mosdepth [2024-09-11 21:10:24,328] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-09-11 21:10:24,332] multiqc [DEBUG ] No samples found: qualimap [2024-09-11 21:10:24,338] multiqc [DEBUG ] No samples found: preseq [2024-09-11 21:10:24,344] multiqc [DEBUG ] No samples found: quast [2024-09-11 21:10:24,351] multiqc [DEBUG ] No samples found: qorts [2024-09-11 21:10:24,356] multiqc [DEBUG ] No samples found: rna_seqc [2024-09-11 21:10:24,362] multiqc [DEBUG ] No samples found: rockhopper [2024-09-11 21:10:24,368] multiqc [DEBUG ] No samples found: rsem [2024-09-11 21:10:24,384] multiqc [DEBUG ] No samples found: rseqc [2024-09-11 21:10:24,390] multiqc [DEBUG ] No samples found: busco [2024-09-11 21:10:24,396] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-09-11 21:10:24,402] multiqc [DEBUG ] No samples found: disambiguate [2024-09-11 21:10:24,408] multiqc [DEBUG ] No samples found: supernova [2024-09-11 21:10:24,427] multiqc [DEBUG ] No samples found: deeptools [2024-09-11 21:10:24,434] multiqc [DEBUG ] No samples found: sargasso [2024-09-11 21:10:24,440] multiqc [DEBUG ] No samples found: verifybamid [2024-09-11 21:10:24,446] multiqc [DEBUG ] No samples found: mirtrace [2024-09-11 21:10:24,453] multiqc [DEBUG ] No samples found: happy [2024-09-11 21:10:24,458] multiqc [DEBUG ] No samples found: mirtop [2024-09-11 21:10:24,467] multiqc [DEBUG ] No samples found: homer [2024-09-11 21:10:24,473] multiqc [DEBUG ] No samples found: macs2 [2024-09-11 21:10:24,479] multiqc [DEBUG ] No samples found: theta2 [2024-09-11 21:10:24,486] multiqc [DEBUG ] No samples found: snpeff [2024-09-11 21:10:24,495] multiqc [DEBUG ] No samples found: gatk [2024-09-11 21:10:24,500] multiqc [DEBUG ] No samples found: htseq [2024-09-11 21:10:24,508] multiqc [DEBUG ] No samples found: bcftools [2024-09-11 21:10:24,514] multiqc [DEBUG ] No samples found: featureCounts [2024-09-11 21:10:24,522] multiqc [DEBUG ] No samples found: fgbio [2024-09-11 21:10:24,538] multiqc [DEBUG ] No samples found: dragen [2024-09-11 21:10:24,544] multiqc [DEBUG ] No samples found: dedup [2024-09-11 21:10:24,550] multiqc [DEBUG ] No samples found: damageprofiler [2024-09-11 21:10:24,578] multiqc [DEBUG ] No samples found: biobambam2 [2024-09-11 21:10:24,583] multiqc [DEBUG ] No samples found: mtnucratio [2024-09-11 21:10:24,585] multiqc [DEBUG ] No samples found: picard [2024-09-11 21:10:24,591] multiqc [DEBUG ] No samples found: prokka [2024-09-11 21:10:24,596] multiqc [DEBUG ] No samples found: samblaster [2024-09-11 21:10:24,608] multiqc [DEBUG ] No samples found: samtools [2024-09-11 21:10:24,614] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-09-11 21:10:24,622] multiqc [DEBUG ] No samples found: bamtools [2024-09-11 21:10:24,627] multiqc [DEBUG ] No samples found: jellyfish [2024-09-11 21:10:24,639] multiqc [DEBUG ] No samples found: vcftools [2024-09-11 21:10:24,645] multiqc [DEBUG ] No samples found: longranger [2024-09-11 21:10:24,651] multiqc [DEBUG ] No samples found: stacks [2024-09-11 21:10:24,657] multiqc [DEBUG ] No samples found: varscan2 [2024-09-11 21:10:24,675] multiqc [DEBUG ] No samples found: bbmap [2024-09-11 21:10:24,681] multiqc [DEBUG ] No samples found: bismark [2024-09-11 21:10:24,688] multiqc [DEBUG ] No samples found: biscuit [2024-09-11 21:10:24,693] multiqc [DEBUG ] No samples found: hicexplorer [2024-09-11 21:10:24,700] multiqc [DEBUG ] No samples found: hicup [2024-09-11 21:10:24,705] multiqc [DEBUG ] No samples found: hicpro [2024-09-11 21:10:24,711] multiqc [DEBUG ] No samples found: salmon [2024-09-11 21:10:24,717] multiqc [DEBUG ] No samples found: kallisto [2024-09-11 21:10:24,723] multiqc [DEBUG ] No samples found: slamdunk [2024-09-11 21:10:24,728] multiqc [DEBUG ] No samples found: star [2024-09-11 21:10:24,734] multiqc [DEBUG ] No samples found: hisat2 [2024-09-11 21:10:24,740] multiqc [DEBUG ] No samples found: tophat [2024-09-11 21:10:24,745] multiqc [DEBUG ] No samples found: bowtie2 [2024-09-11 21:10:24,751] multiqc [DEBUG ] No samples found: bowtie1 [2024-09-11 21:10:24,757] multiqc [DEBUG ] No samples found: snpsplit [2024-09-11 21:10:24,762] multiqc [DEBUG ] No samples found: kat [2024-09-11 21:10:24,767] multiqc [DEBUG ] No samples found: leehom [2024-09-11 21:10:24,773] multiqc [DEBUG ] No samples found: adapterRemoval [2024-09-11 21:10:24,779] multiqc [DEBUG ] No samples found: clipandmerge [2024-09-11 21:10:24,785] multiqc [DEBUG ] No samples found: cutadapt [2024-09-11 21:10:24,791] multiqc [DEBUG ] No samples found: flexbar [2024-09-11 21:10:24,797] multiqc [DEBUG ] No samples found: kaiju [2024-09-11 21:10:24,802] multiqc [DEBUG ] No samples found: kraken [2024-09-11 21:10:24,808] multiqc [DEBUG ] No samples found: malt [2024-09-11 21:10:24,814] multiqc [DEBUG ] No samples found: trimmomatic [2024-09-11 21:10:24,820] multiqc [DEBUG ] No samples found: sickle [2024-09-11 21:10:24,825] multiqc [DEBUG ] No samples found: skewer [2024-09-11 21:10:24,831] multiqc [DEBUG ] No samples found: sortmerna [2024-09-11 21:10:24,837] multiqc [DEBUG ] No samples found: biobloomtools [2024-09-11 21:10:24,843] multiqc [DEBUG ] No samples found: fastq_screen [2024-09-11 21:10:24,848] multiqc [DEBUG ] No samples found: afterqc [2024-09-11 21:10:24,854] multiqc [DEBUG ] No samples found: fastp [2024-09-11 21:10:28,519] multiqc.modules.fastqc.fastqc [INFO ] Found 28 reports [2024-09-11 21:10:28,789] multiqc [DEBUG ] No samples found: pycoqc [2024-09-11 21:10:28,795] multiqc [DEBUG ] No samples found: minionqc [2024-09-11 21:10:28,800] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-09-11 21:10:28,806] multiqc [DEBUG ] No samples found: clusterflow [2024-09-11 21:10:28,812] multiqc [DEBUG ] No samples found: bcl2fastq [2024-09-11 21:10:28,818] multiqc [DEBUG ] No samples found: interop [2024-09-11 21:10:28,823] multiqc [DEBUG ] No samples found: ivar [2024-09-11 21:10:28,829] multiqc [DEBUG ] No samples found: flash [2024-09-11 21:10:28,834] multiqc [DEBUG ] No samples found: seqyclean [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-09-11 21:10:28,834] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-09-11 21:10:28,835] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-09-11 21:10:28,869] multiqc [INFO ] Compressing plot data [2024-09-11 21:10:29,355] multiqc [INFO ] Report : multiqc_report.html [2024-09-11 21:10:29,355] multiqc [INFO ] Data : multiqc_data [2024-09-11 21:10:29,355] multiqc [DEBUG ] Moving data file from '/state/partition1/job-50876299/tmpybiryl4z/multiqc_data' to '/scratch/gencore/GENEFLOW/work/nf/00/d3e467c6c135b28fbff00551a80577/merged/multiqc_data' [2024-09-11 21:11:09,434] multiqc [INFO ] MultiQC complete