Basic Statistics
Measure | Value |
---|---|
Filename | HLYLTBGX9_n02_HTO5n.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 27597023 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 180979 | 0.6557917497115541 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGATAA | 436315 | 0.0 | 42.81833 | 1 |
ACTGTCT | 504675 | 0.0 | 42.728786 | 1 |
CTGTCTA | 504750 | 0.0 | 42.722603 | 2 |
CGATAAT | 437555 | 0.0 | 42.711296 | 2 |
GTCTAAC | 504550 | 0.0 | 42.70684 | 4 |
GGCTGAG | 743925 | 0.0 | 42.70195 | 3 |
GAGGCTG | 745510 | 0.0 | 42.695126 | 1 |
GCTGAGC | 743010 | 0.0 | 42.683838 | 4 |
CTAACGG | 503795 | 0.0 | 42.67165 | 6 |
TGTCTAA | 505850 | 0.0 | 42.644226 | 3 |
CATGTTA | 242240 | 0.0 | 42.63831 | 2 |
CGTATTC | 484295 | 0.0 | 42.63188 | 7 |
TAACGGC | 502870 | 0.0 | 42.61583 | 7 |
GTATTCC | 483410 | 0.0 | 42.607796 | 8 |
TAATGCG | 435580 | 0.0 | 42.589767 | 5 |
TGAGCTA | 746390 | 0.0 | 42.589268 | 6 |
GAGCTAC | 744565 | 0.0 | 42.58444 | 7 |
ACGTATT | 489275 | 0.0 | 42.58118 | 6 |
GTGACGT | 489600 | 0.0 | 42.57681 | 3 |
TATTCCC | 483230 | 0.0 | 42.56694 | 9 |