Basic Statistics
Measure | Value |
---|---|
Filename | HLYLTBGX9_n02_BLG5n.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36164355 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 107644 | 0.2976522047745632 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGTCCTA | 513080 | 0.0 | 42.565933 | 11 |
GTCCTAC | 512490 | 0.0 | 42.54052 | 12 |
TCAACGC | 355370 | 0.0 | 42.526012 | 11 |
TCCTACC | 509050 | 0.0 | 42.51813 | 13 |
TTGTCCG | 1465365 | 0.0 | 42.481716 | 12 |
GTCTTTG | 1110500 | 0.0 | 42.4763 | 11 |
AACGCTT | 355365 | 0.0 | 42.47472 | 13 |
TGTCCGA | 1465135 | 0.0 | 42.474712 | 13 |
CAACGCT | 355310 | 0.0 | 42.456974 | 12 |
GTCCGAC | 1464330 | 0.0 | 42.444885 | 14 |
TCCGACA | 1467595 | 0.0 | 42.43703 | 15 |
AGTCTTT | 348985 | 0.0 | 42.436584 | 10 |
ATGTCCT | 123820 | 0.0 | 42.416645 | 10 |
CTGTCCT | 134035 | 0.0 | 42.401493 | 10 |
CCGACAA | 1469400 | 0.0 | 42.381714 | 16 |
CGTCTTT | 212525 | 0.0 | 42.37444 | 10 |
TCTTTGT | 1112305 | 0.0 | 42.363873 | 12 |
GGTCTTT | 390520 | 0.0 | 42.360172 | 10 |
CGACAAT | 1469635 | 0.0 | 42.33342 | 17 |
TTTGTCA | 1110175 | 0.0 | 42.332104 | 14 |