Basic Statistics
Measure | Value |
---|---|
Filename | HLYLTBGX9_n02_ADT5n.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28247895 |
Sequences flagged as poor quality | 0 |
Sequence length | 49 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 210964 | 0.7468308700524411 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCATTCT | 754425 | 0.0 | 42.93869 | 1 |
TTAACCA | 1143655 | 0.0 | 42.891224 | 1 |
TAACCAG | 1145970 | 0.0 | 42.86028 | 2 |
CATTCTG | 755285 | 0.0 | 42.847782 | 2 |
ACCAGTT | 1144855 | 0.0 | 42.779305 | 4 |
CCAGTTG | 1144970 | 0.0 | 42.772083 | 5 |
TTCTGTC | 756870 | 0.0 | 42.762714 | 4 |
ATTCTGT | 758795 | 0.0 | 42.761528 | 3 |
GTTGTAC | 1143635 | 0.0 | 42.753662 | 8 |
TCTGTCA | 755930 | 0.0 | 42.742683 | 5 |
GTACCCC | 1135075 | 0.0 | 42.73933 | 11 |
TGATCTA | 404430 | 0.0 | 42.727745 | 2 |
TACCCCC | 1129285 | 0.0 | 42.723885 | 12 |
TTGTACC | 1138490 | 0.0 | 42.716652 | 9 |
AGTTGTA | 1150875 | 0.0 | 42.710285 | 7 |
CTGTCAC | 755010 | 0.0 | 42.708775 | 6 |
GATCTAA | 405480 | 0.0 | 42.702393 | 3 |
AACCAGT | 1149755 | 0.0 | 42.68423 | 3 |
CAGTTGT | 1149125 | 0.0 | 42.67599 | 6 |
TGTCACC | 752395 | 0.0 | 42.67406 | 7 |