FastQCFastQC Report
Wed 6 Feb 2019
HLYLTBGX9_n01_BLG5n.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLYLTBGX9_n01_BLG5n.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36164355
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATGCC177300.018.2519328
CCGGGAT147150.018.103981
GGGAATG145250.017.9621351
GTTACCT219800.017.83471910
GATGCCT165050.017.8313839
AGAGACC104150.017.6868156
GGTTACC222350.017.6302789
GGAACTT173150.017.337571
CCACTAC219100.017.3162981
TCTAAGG166550.017.28641310
AGACCGG111150.017.2653188
CCAGAGA117900.017.2608224
GACCGGA111900.017.1407079
TATGCCC85150.017.0640071
TGGACGC113850.017.0575351
TAAGAAC83350.017.03690110
GACCAGT162600.016.9865193
GCCATAG126700.016.98531210
CACACAA245050.016.980211
ACAAAGA159100.016.9583134
Produced by FastQC (version 0.11.5)