FastQCFastQC Report
Wed 6 Feb 2019
HLYLTBGX9_n01_ADT5n.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLYLTBGX9_n01_ADT5n.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28247895
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT370200.019.270821
TGCGATT342800.018.8944512
CCGGGAT164550.018.8090251
CGATTCA349300.018.7808364
AGATGCC172150.018.7745428
GATTCAA344250.018.7282525
AATCACG354400.018.609210
TACCTAT302200.018.6004141
ATTCAAT344100.018.4546416
GATGCCT167200.018.4392419
GCGATTC358500.018.3989683
GGGAATG169550.018.372311
GACCGGA142250.018.3622849
TTCAATC348550.018.3591617
CCAGAGA142950.018.3424854
AGACCGG142750.018.3399688
ACTGGTG252550.018.3132552
GAGACCG135300.018.300327
AGGATGG130000.018.3002138
TAGCCGG169800.018.256921
Produced by FastQC (version 0.11.5)