FastQCFastQC Report
Fri 8 Feb 2019
HLYKLBGX9_n02_Sample_negctrl1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLYKLBGX9_n02_Sample_negctrl1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1022
Sequences flagged as poor quality0
Sequence length151
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGTGGCTTGTACGTGCGTGTCGGCTTCGCAGGCCACGCGATAGCCAAT20.19569471624266144No Hit
GGCCGGCACGGGGGCGCGGGAGTGAGGGAGCGGGAGCCTTCCCGCCGCCC20.19569471624266144No Hit
GTCGGGGAACACGCGGATCCAGATACGGCCACCACGCTTGACGTGGCGGG20.19569471624266144No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19569471624266144No Hit
CTACTCAGGAAGTCTTTTGTAAAACAGGTGGAGTGTCCTGATGTCTGGTT20.19569471624266144No Hit
AGATAGATGAATCCACGAAGATGAGGAAAAACCAGCGCAAAAATGCTGAA20.19569471624266144No Hit
CGACAACTCGCATCGGATTGACGACACTCGTCCACGAGCCGATCCCGGTC20.19569471624266144No Hit
GACTAAGCCTACCTATAGAAGTTATCAGACTGAGCCTACCTATAGAGGTT20.19569471624266144No Hit
TTTCATATCTATCTTAATATTATGATGATTTTTATAGTACAGATTTACTT20.19569471624266144No Hit
AGCGGGGCTCACTCATTTTCATCCAGCCCGGCGGGAAGCGAGAGCGGGGC20.19569471624266144No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)