FastQCFastQC Report
Thu 7 Feb 2019
HLYKLBGX9_n02_Sample_21.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLYKLBGX9_n02_Sample_21.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96685
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCCT100.007083443144.983444
GTACTAT300.00192339172.56681
GGCTATA300.00192339172.56681
GATACAC451.1860575E-464.4704363
GTCCTAA350.003543800762.200121
GAATATA501.992031E-458.053441
TAATCCG502.0022603E-457.9933785
GACGTCT400.006037152454.3687934
CCCAATG450.009597694548.352832
TCTACGC450.009597694548.352832
TAGAACA450.00961734948.3278164
GAACACA657.3077175E-444.6102945
GATCAAA750.001470082138.7022931
GCACGAA800.00202352736.264623
GTAATCC950.00470904830.5228314
GTTTAAT1050.00764015527.6444991
GGGGGGG152750.09.0169735145
AAAAAAG10457.794512E-58.324409145
AGGGGGG7954.483809E-98.206611145
ATTAAAA16303.879296E-56.6710167145
Produced by FastQC (version 0.11.5)