FastQCFastQC Report
Thu 7 Feb 2019
HLYKLBGX9_n02_Sample_201.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLYKLBGX9_n02_Sample_201.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35458
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGTA100.007062243145.07
TTGTCCC100.007062243145.05
ACCCTAT100.007062243145.08
AGTGCTA100.007062243145.05
GCATAGA100.007062243145.01
TCATAGA259.311701E-487.04
TGAATCT200.00606116429.040-44
GGGGGGG63200.09.636076145
AGGGGGG3602.2423701E-58.055555145
AAAGGGG3650.00121097157.9452057145
AAAAGGG4101.4834208E-47.0731707145
AAAAAGG4353.4554684E-45.3333335135-139
Produced by FastQC (version 0.11.5)