Basic Statistics
Measure | Value |
---|---|
Filename | HLYKLBGX9_n01_Sample_21.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 96685 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTTATAG | 30 | 0.0019304373 | 72.5 | 1 |
TATACAG | 35 | 0.0035567654 | 62.142857 | 5 |
TACTATA | 45 | 0.009613012 | 48.333336 | 2 |
CTCTCAC | 45 | 0.009613012 | 48.333336 | 3 |
TATTACA | 60 | 4.922792E-4 | 48.333332 | 2 |
CACAATG | 70 | 0.0010519059 | 41.42857 | 7 |
GTATTAG | 80 | 0.0020275416 | 36.25 | 1 |
AATGCCC | 85 | 0.0027298054 | 34.117645 | 3 |
ATTACAC | 90 | 0.0036121611 | 32.222225 | 3 |
TTACACA | 90 | 0.0036121611 | 32.222225 | 4 |
CCAAAGC | 125 | 5.119888E-4 | 29.000002 | 3 |
CTTATTT | 105 | 0.0076746102 | 27.619047 | 1 |
CACGAGC | 150 | 0.0014845484 | 24.166666 | 145 |
AGGCTGC | 265 | 9.238905E-5 | 19.150942 | 145 |
TGTGCGA | 60 | 0.004697376 | 14.500001 | 10-14 |
CACCCAC | 65 | 0.007983188 | 13.384615 | 35-39 |
AAGGGGG | 685 | 2.519846E-8 | 11.642336 | 145 |
GGGGGGG | 18385 | 0.0 | 8.596683 | 145 |
ATGGGGG | 215 | 9.835494E-4 | 7.4186053 | 140-144 |
TGGGGGG | 320 | 0.0015629865 | 6.796875 | 145 |