FastQCFastQC Report
Thu 7 Feb 2019
HLYKLBGX9_n01_Sample_201.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLYKLBGX9_n01_Sample_201.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35458
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACTAA100.007062243145.01
TCGACTG100.007062243145.0145
ACCCCGT100.007062243145.01
TTACTCT203.8350333E-4108.754
CAATTAT350.003538198862.142861
TCCCAGC350.003538198862.142863
TATCAAG450.00956320548.3333322
GCCGCCT350.003647034520.71428730-34
GCTGATC400.00789108218.12520-24
GGGGGGG78200.08.900255145
AGGGGGG3250.00185959395.8135-139
AAAGGGG3150.0083674065.5238094125-129
AAAAAAA23652.9704264E-55.5179706145
Produced by FastQC (version 0.11.5)