FastQCFastQC Report
Fri 3 Sep 2021
HLWNJBGXJ_n02_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLWNJBGXJ_n02_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65966244
Sequences flagged as poor quality0
Sequence length25
%GC17

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAATTTT10690961.6206713239577502No Hit
GGGGGGGGGGGGGGGGGGGGGGGGG10586651.6048586910602336No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA9531881.4449632754594912No Hit
TTTTTTTTTTTTTTTTTTTTTTTTT6650521.0081701786750206No Hit
AAAAAAAAAAAAAAAAAAAAAATTT6256310.9484108266039826No Hit
AAAAAAAAAAAAAAAAAAAAATTTA5321280.8066671190192366No Hit
AAAAAAAAAAAAAAAAAAAAAAAAT5195590.7876134345317584No Hit
AAAAAAAAAAAAAAAAAAAATTTTT4327210.6559733793544468No Hit
AAAAAAAAAAAAAAAAAAAAAAATT3972410.6021882949709855No Hit
TTTTTTTTTTTTTTTTTTTTTTTTA3766900.5710344824240713No Hit
AAAAAAAAAAAAAAAAAAAAAATTA3441930.5217714078127594No Hit
AAAAAAAAAAAAAAAAAAAAAATAA2348430.3560048075497523No Hit
AAAAAAAAAAAAAAAAAAAATTTTA2281910.34592086219127466No Hit
AAAAAAAAAAAAAAAAAAAAAAATA2073320.31430014417677016No Hit
AAAAAAAAAAAAAAAAAAAAATTAA1987260.30125407776741087No Hit
TTTTTTTTTTTTTTTTTTTTTTTAT1397690.21187957889492692No Hit
AAAAAAAAAAAAAAAAAAAAATAAA1355180.20543537388607422No Hit
TTTTTTTTTTTTTTTTTTTTTTTAA1268240.19225590591454622No Hit
AAAAAAAAAAAAAAAAAAATTTTTT1165550.17668885316556754No Hit
TTTTTTTTTTTTTTTTTTTTTTTTG968590.14683115806926947No Hit
TAAAAAAAAAAAAAAAAAAAATTTT889890.13490081381623No Hit
AAAAAAAAAAAAAAAAAAAAAATAT859110.13023479099401203No Hit
CAAAAAAAAAAAAAAAAAAAATTTT799720.12123170147446928No Hit
AAAAAAAAAAAAAAAAAAAAATTAT763060.11567431366866969No Hit
AAAAAAAAAAAAAAAAAAAATTTAA761060.11537112830010451No Hit
AAAAAAAAAAAAAAAAAAATATTTT716620.10863434941058642No Hit
CCCCCCCCCCCCCCCCCCCCCCGGG662070.10036496848297138No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)