FastQCFastQC Report
Wed 8 Feb 2023
HLWJFDRX2_n02_15R_1-4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLWJFDRX2_n02_15R_1-4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8765963
Sequences flagged as poor quality0
Sequence length101
%GC28

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTAGTTACCATCAAACAAACTATAACTGATTTAA911021.0392697299771856No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG879821.0036775195149694No Hit
TTTTTTTTTTTTTTTTTAGTTACCATCAAACAAACTATAACTGATTTAAT562030.6411503219897232No Hit
TTTTTTTTTTTTTTTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCG436020.4974011412094712No Hit
TTTTTTTTTTTTTTTTTTGGTTACCATCAAACAAACTATAACTGATTTAA397310.4532417031648434No Hit
TTTTTTTTTTTTTTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGG348780.39787984503242824No Hit
TTTTTTTTTTTTTTTTTTAATCATAAAAACCCATCTCATAAATAACGTCA347260.3961458655483716No Hit
TTTTTTTTTTTTTTTTTGGTTACCATCAAACAAACTATAACTGATTTAAT302140.3446740534953205No Hit
TTTTTTTTTTTTTTTTTTTAGTTACCATCAAACAAACTATAACTGATTTA289760.3305512469080693No Hit
TTTTTTTTTTTTTTTTTTATCTTTACCTCGCGGTACTTGTTCGCTATCGG266520.3040396132176237No Hit
TTTTTTTTTTTTTTTTTTCATAAAAACCCATCTCATAAATAACGTCATGC252300.2878177788338828No Hit
TTTTTTTTTTTTTTTTTCATAAAAACCCATCTCATAAATAACGTCATGCA209930.23948310071580267No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG158480.18079017673243658No Hit
TTTTTTTTTTTTTTTTAGTTACCATCAAACAAACTATAACTGATTTAATG154240.17595328659269951No Hit
TTTTTTTTTTTTTTTTTTCAGTTACCATCAAACAAACTATAACTGATTTA149110.1701011058340082No Hit
TTTTTTTTTTTTTTTTTTAAATAACGTCATGCATTACATGTTAATTATTA147650.1684355729085327No Hit
TTTTTTTTTTTTTTTTTCAGTTACCATCAAACAAACTATAACTGATTTAA147570.16834431083042445No Hit
TTTTTTTTTTTTTTTTTTTGGTTACCATCAAACAAACTATAACTGATTTA145650.16615402095582651No Hit
TTTTTTTTTTTTTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGT132570.1512326711851282No Hit
TTTTTTTTTTTTTTTTTATCTTTACCTCGCGGTACTTGTTCGCTATCGGT129830.14810694500992075No Hit
TTTTTTTTTTTTTTTTTAATCATAAAAACCCATCTCATAAATAACGTCAT125610.14329287038971075No Hit
TTTTTTTTTTTTTTTTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATC123200.14054360028669982No Hit
TTTTTTTTTTTTTTTTTTGTTTCGTTTAGTACGAGATGGCTTCACACCTC112690.12855404477522892No Hit
TTTTTTTTTTTTTTTTGGTTACCATCAAACAAACTATAACTGATTTAATG111030.1266603566544828No Hit
TTTTTTTTTTTTTTTTTTGTTACCATCAAACAAACTATAACTGATTTAAT102770.11723754708980634No Hit
TTTTTTTTTTTTTTTTTTTAATCATAAAAACCCATCTCATAAATAACGTC102610.11705502293358984No Hit
TTTTTTTTTTTTTTTTTTTATCTTTACCTCGCGGTACTTGTTCGCTATCG91320.10417566216056352No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)