FastQCFastQC Report
Wed 8 Feb 2023
HLWJFDRX2_n01_7R_1-17.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLWJFDRX2_n01_7R_1-17.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8263093
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAA164080.19856971233411022No Hit
GCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAA145260.1757937372845737No Hit
GCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGT143640.17383321233344465No Hit
CAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTA127580.15439739090435023No Hit
GGGGGTTTGGTGTTGTTTATCATGGCGATCTAAATGGCTCAGAGCAAGTA86530.10471865680320917No Hit
TCTTTGTATAGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAAT86090.1041861685448778No Hit
TATTCTTATATCTGGCAGCGAGAAGGAAGAGCTAAAGACGGTTGCAGCGG85320.10325431409279795No Hit
GGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAG84770.10258870376988374No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)