FastQCFastQC Report
Wed 8 Feb 2023
HLWJFDRX2_n01_6R_1-1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLWJFDRX2_n01_6R_1-1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14540684
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGT237240.16315601109273814No Hit
TTTAAGTATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA184140.12663778402721632No Hit
CATATCTATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACG156170.10740210020381434No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)