FastQCFastQC Report
Wed 8 Feb 2023
HLWJFDRX2_n01_6R_1-17.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLWJFDRX2_n01_6R_1-17.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7858017
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAA145960.1857466075728775No Hit
TAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGT141830.18049082866580718No Hit
TTTAAGTATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA119670.15229032973586085No Hit
CAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTA100380.12774215174133627No Hit
GCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGT98500.12534969064078125No Hit
CGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAG96900.12331355353392592No Hit
CATATCTATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACG86040.10949327292114537No Hit
TTATCATATAATTTCTGTTGAATTACGTTAAGCATGTAATAATTAACATG82130.10451746286626766No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)