FastQCFastQC Report
Wed 8 Feb 2023
HLWJFDRX2_n01_2R_1-13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLWJFDRX2_n01_2R_1-13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7624490
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGT164270.21545047603183953No Hit
TTTAAGTATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA150050.19680004826552333No Hit
CATATCTATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACG104330.13683538177635488No Hit
CGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAG89590.11750294118032813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)