FastQCFastQC Report
Thu 20 Jul 2023
HLTLYDMXY_n02_CIVR__Ferret_mRNA_P3_H9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLTLYDMXY_n02_CIVR__Ferret_mRNA_P3_H9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAGCAGTGCAGTAAGTAGAACAAACAATCCAGAATAGGTCAACTCACCA111.11111111111111No Hit
GTTATATAACGACATGACATATAATCAAAAAAAAACATATAAAATAAACA111.11111111111111No Hit
AAAACAGCCCCAAATCGCAATTCCAACAGTGCACAAAGGAAGTTGTCCTA111.11111111111111No Hit
GCTAGATATTGACCCAAATTCTAATTCAGACAGCAATAAGCAACACCCAT111.11111111111111No Hit
TCAAAGACAACAACAAACCCAAAACCTAGAAAAGCAGCGACACAAAAGAC111.11111111111111No Hit
AACCAGTCGAAGAGGCACCATTAAATCATTAACTCAGAATTAACAGGCAC111.11111111111111No Hit
AAAATGATTACATAAAAAAATTCACATACTATTATAAAAAAACTGTTAAA111.11111111111111No Hit
CCTGTCATACTCCTCAACAAACCATATGTCCAAATCCAAGTCGGTCACCA111.11111111111111No Hit
CGCAGGCACAGGGAGGGGAAAGCACAGGACTTCTGAAATCATCACCGCCC111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)