FastQCFastQC Report
Thu 20 Jul 2023
HLTLYDMXY_n02_CIVR__Ferret_mRNA_P3_F9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLTLYDMXY_n02_CIVR__Ferret_mRNA_P3_F9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29.090909090909092No Hit
GGTAGCCCATGTGATGGGGATGCGGTGGGTGGCATAGACAGTGAAGGCTA14.545454545454546No Hit
GGCTGAGCGGACTGCACCCGGGGGGGCTGGGGGGGGGGCACCCACAAGTG14.545454545454546No Hit
AGGACCGATATGATGAGGCTGCTCAACACAGTATCTCTGGAAATGACCCA14.545454545454546No Hit
TGCTTTCTGGCCTTCCCCCAGGCCAAGACCTTCCACGAGGCGAGCGAGGA14.545454545454546No Hit
CGGCATGGGGGCGGAGGCGGGGGCACGAGCCCCTGGAGAGAGTCTTTAAA14.545454545454546No Hit
CTGGCCTCAGTTCACTGGATCTGAACAACCCTGCTGGAAACAAAAAGCAA14.545454545454546No Hit
CCCTTTCATAATAGAAGCTCAAACGCCCATAGCTGAAATCATATAGATTC14.545454545454546No Hit
CACACCAACCATGCCCAGGTTAATCAAGGCGGTGGCCCAGGCTCTGGGAT14.545454545454546No Hit
TGCGTGCATGGATCCGGGCGCCGCGCTGCAGAGGCGGGCCGGGGGCGGCG14.545454545454546No Hit
AAAAAGATAGTGGTTGTTTTTCCTAAATGAAATAACTCTCTTTTTCCCCC14.545454545454546No Hit
CACAGCTTACCAACACCACGCCAAACCGCAATGCCGGGGACAAAAGCGAG14.545454545454546No Hit
CCAAGTCTATGTTTGGGATCAGTTTTCTTTGCATAATCCAAGCAATCATA14.545454545454546No Hit
CAGAAGTGGGTGGCTGTGGTGGTGCCTTCTGGAGAGGAGCAGTAATACAG14.545454545454546No Hit
GCCGCTCCTCAGGTTCTGGCCCGCAGAGCCCCGTCGTGCCGGCGCCGGGT14.545454545454546No Hit
GGAAGAGCAGGGCACCGTAGGTGTGGTGCTCCAGCACGACCTGGGCCAGC14.545454545454546No Hit
AGAAGCACAAGGACAAATGGAAACACCCAGAGCGTGCCGATGCCAAGGAC14.545454545454546No Hit
GTTGGGGCCCAGCCCGGAGTGAGACCCAGCCAGTGGGCGCTGGCGCCTGG14.545454545454546No Hit
GTCCATTGTTTGAACTGTCTCTTCCAGCACCTCGATTTCCAGGCTGGTGA14.545454545454546No Hit
TGGGGTTACGTCTGTGGGCTGGAGTTGGATTCGGCGGGAACGGTGGTGGG14.545454545454546No Hit
TGAACAGATGCCTATTTAGCTAGAGTTTTGCCTAAGATCAGTTTATTTTT14.545454545454546No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)