FastQCFastQC Report
Thu 20 Jul 2023
HLTLYDMXY_n01_CIVR__Ferret_mRNA_P3_H9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLTLYDMXY_n01_CIVR__Ferret_mRNA_P3_H9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTTCCAACAGGACCATAAACAACAAAACCGCCATCACCAGCAAAGTC111.11111111111111No Hit
CATTACACCTGGCAGCCCTGAGTGCCGTACTCCAGGAGGAAGTTCCTGAG111.11111111111111No Hit
AGAGAAACCAAAGTGGATCAAAATAACTAATACAGCACACCACAATATGA111.11111111111111No Hit
CATCTCACAAAAAAACAAGGCCCAGAAAACTTATCTTAAACACATAATCA111.11111111111111No Hit
TTCAAAAACTTCTATATCCTTGCCTTTCTTTCCTCCTCACATATAATAAA111.11111111111111No Hit
ATTAAACAAAAGAACATAACCAAACAACAGCTGAATAAAACCGACATAAA111.11111111111111No Hit
TTAAGAAATACCAATTCTCATACCAACTCAGATTTCCAAGTATCCTTAAT111.11111111111111No Hit
GTCCAAGAAATGACTAGCCCAGTGGCCTGAGGGCCAAACCCTAGACTCAG111.11111111111111No Hit
AACAGATCCAAAAGAAAACACTCATATAAGAAACTACCTCCAATGAAAAA111.11111111111111No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)