Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HLTFCAFXY_n01_ncm2-1 warn 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 13764140.0 pass warn warn 39.0 53.9655178524 HLTFCAFXY_n01_ncm2-1.fastq.gz pass pass HLTFCAFXY_n01_ncm2-2 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 14393803.0 pass warn fail 42.0 39.6873719554 HLTFCAFXY_n01_ncm2-2.fastq.gz pass pass HLTFCAFXY_n01_ncm2-3 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 13757834.0 pass warn fail 42.0 40.3684730795 HLTFCAFXY_n01_ncm2-3.fastq.gz pass pass HLTFCAFXY_n01_ncm2-4 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 18089306.0 pass warn warn 41.0 44.7397425802 HLTFCAFXY_n01_ncm2-4.fastq.gz pass pass HLTFCAFXY_n01_ncm2-5 warn 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 13750583.0 pass warn warn 40.0 50.9508040887 HLTFCAFXY_n01_ncm2-5.fastq.gz pass pass HLTFCAFXY_n01_ncm2-6 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 13301362.0 pass pass warn 40.0 52.4785753413 HLTFCAFXY_n01_ncm2-6.fastq.gz pass pass HLTFCAFXY_n01_ncm2-7 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 15278920.0 pass warn fail 42.0 48.3408448414 HLTFCAFXY_n01_ncm2-7.fastq.gz pass pass HLTFCAFXY_n01_ncm2-8 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 14197727.0 pass warn fail 42.0 44.437459697 HLTFCAFXY_n01_ncm2-8.fastq.gz pass pass HLTFCAFXY_n01_undetermined fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 17273975.0 pass warn warn 46.0 52.1636307678 HLTFCAFXY_n01_undetermined.fastq.gz pass pass HLTFCAFXY_n01_vk1-1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 7616753.0 pass warn pass 30.0 36.4222102378 HLTFCAFXY_n01_vk1-1.fastq.gz pass pass HLTFCAFXY_n01_vk1-2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 13276878.0 pass warn warn 39.0 48.4510074507 HLTFCAFXY_n01_vk1-2.fastq.gz pass pass HLTFCAFXY_n01_vk1-3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 11448353.0 pass warn warn 39.0 46.7543132074 HLTFCAFXY_n01_vk1-3.fastq.gz pass pass HLTFCAFXY_n02_ncm2-1 warn 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 13764140.0 pass fail fail 40.0 59.5444347379 HLTFCAFXY_n02_ncm2-1.fastq.gz pass pass HLTFCAFXY_n02_ncm2-2 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 14393803.0 pass fail fail 43.0 47.3492163658 HLTFCAFXY_n02_ncm2-2.fastq.gz pass pass HLTFCAFXY_n02_ncm2-3 fail 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 13757834.0 pass fail fail 42.0 46.8045945436 HLTFCAFXY_n02_ncm2-3.fastq.gz pass pass HLTFCAFXY_n02_ncm2-4 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 18089306.0 pass fail fail 42.0 50.0005827811 HLTFCAFXY_n02_ncm2-4.fastq.gz pass pass HLTFCAFXY_n02_ncm2-5 warn 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 13750583.0 pass fail fail 41.0 56.7081486626 HLTFCAFXY_n02_ncm2-5.fastq.gz pass pass HLTFCAFXY_n02_ncm2-6 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 13301362.0 pass fail fail 41.0 58.346978349 HLTFCAFXY_n02_ncm2-6.fastq.gz pass pass HLTFCAFXY_n02_ncm2-7 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 15278920.0 pass fail fail 43.0 58.0421770158 HLTFCAFXY_n02_ncm2-7.fastq.gz pass pass HLTFCAFXY_n02_ncm2-8 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 14197727.0 pass fail fail 43.0 50.8528592737 HLTFCAFXY_n02_ncm2-8.fastq.gz pass pass HLTFCAFXY_n02_undetermined warn 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 17273975.0 pass fail fail 64.0 49.4957584519 HLTFCAFXY_n02_undetermined.fastq.gz pass pass HLTFCAFXY_n02_vk1-1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 7616753.0 pass fail warn 32.0 40.5236667149 HLTFCAFXY_n02_vk1-1.fastq.gz pass pass HLTFCAFXY_n02_vk1-2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 13276878.0 pass fail warn 39.0 54.9436893802 HLTFCAFXY_n02_vk1-2.fastq.gz pass pass HLTFCAFXY_n02_vk1-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 11448353.0 pass fail warn 39.0 51.9567646517 HLTFCAFXY_n02_vk1-3.fastq.gz pass pass