Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HLNTYAFXY_n01_4_Fe500 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 25184638.0 pass fail warn 43.0 20.2229640409 HLNTYAFXY_n01_4_Fe500.fastq.gz pass pass HLNTYAFXY_n01_4_ctrl pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 25963222.0 pass fail warn 42.0 17.785355467 HLNTYAFXY_n01_4_ctrl.fastq.gz pass pass HLNTYAFXY_n01_5_Fe500 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 18969958.0 pass fail warn 43.0 22.2044765299 HLNTYAFXY_n01_5_Fe500.fastq.gz pass pass HLNTYAFXY_n01_5_ctrl pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 26812181.0 pass fail warn 42.0 15.447697872 HLNTYAFXY_n01_5_ctrl.fastq.gz pass pass HLNTYAFXY_n01_6_Fe500 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 19721193.0 pass fail warn 49.0 18.1464633805 HLNTYAFXY_n01_6_Fe500.fastq.gz pass pass HLNTYAFXY_n01_6_ctrl pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 35910299.0 pass fail warn 43.0 13.3712761565 HLNTYAFXY_n01_6_ctrl.fastq.gz pass pass HLNTYAFXY_n01_PY79_T2_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 995390.0 pass fail warn 45.0 48.6009809303 HLNTYAFXY_n01_PY79_T2_R1.fastq.gz pass pass HLNTYAFXY_n01_PY79_T2_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 829646.0 pass fail warn 45.0 50.6054142929 HLNTYAFXY_n01_PY79_T2_R2.fastq.gz pass pass HLNTYAFXY_n01_PY79_T2_R3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 835334.0 pass fail warn 45.0 53.0083206066 HLNTYAFXY_n01_PY79_T2_R3.fastq.gz pass pass HLNTYAFXY_n01_PY79_T3_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 617616.0 pass fail warn 45.0 52.8602180185 HLNTYAFXY_n01_PY79_T3_R1.fastq.gz pass pass HLNTYAFXY_n01_PY79_T3_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 598129.0 pass fail fail 44.0 51.2336489963 HLNTYAFXY_n01_PY79_T3_R2.fastq.gz pass pass HLNTYAFXY_n01_PY79_T3_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 854364.0 pass fail warn 45.0 48.1544710014 HLNTYAFXY_n01_PY79_T3_R3.fastq.gz pass pass HLNTYAFXY_n01_PY79_T4_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass pass 906125.0 pass fail warn 45.0 51.1118585902 HLNTYAFXY_n01_PY79_T4_R1.fastq.gz pass pass HLNTYAFXY_n01_PY79_T4_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 765810.0 pass fail warn 44.0 51.1164572869 HLNTYAFXY_n01_PY79_T4_R2.fastq.gz pass pass HLNTYAFXY_n01_PY79_T4_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 992496.0 pass fail warn 44.0 47.5346683284 HLNTYAFXY_n01_PY79_T4_R3.fastq.gz pass pass HLNTYAFXY_n01_surD_T2_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass warn 532968.0 pass fail warn 45.0 56.5883951099 HLNTYAFXY_n01_surD_T2_R1.fastq.gz pass pass HLNTYAFXY_n01_surD_T2_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass pass 771091.0 pass fail pass 46.0 52.9371276153 HLNTYAFXY_n01_surD_T2_R2.fastq.gz pass pass HLNTYAFXY_n01_surD_T2_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1615611.0 pass fail warn 46.0 42.2943454847 HLNTYAFXY_n01_surD_T2_R3.fastq.gz pass pass HLNTYAFXY_n01_surD_T3_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 753955.0 pass fail warn 46.0 47.2458961302 HLNTYAFXY_n01_surD_T3_R1.fastq.gz pass pass HLNTYAFXY_n01_surD_T3_R2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 807207.0 pass fail fail 46.0 47.2795959751 HLNTYAFXY_n01_surD_T3_R2.fastq.gz pass pass HLNTYAFXY_n01_surD_T3_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1128160.0 pass fail warn 45.0 44.7390904379 HLNTYAFXY_n01_surD_T3_R3.fastq.gz pass pass HLNTYAFXY_n01_surD_T4_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1461025.0 pass fail warn 45.0 40.4985930789 HLNTYAFXY_n01_surD_T4_R1.fastq.gz pass pass HLNTYAFXY_n01_surD_T4_R2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass warn 784979.0 pass fail warn 45.0 49.7569592002 HLNTYAFXY_n01_surD_T4_R2.fastq.gz pass pass HLNTYAFXY_n01_surD_T4_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 933151.0 pass fail warn 45.0 42.2009341471 HLNTYAFXY_n01_surD_T4_R3.fastq.gz pass pass HLNTYAFXY_n01_surE_T2_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass warn 692094.0 pass fail warn 45.0 52.0353457348 HLNTYAFXY_n01_surE_T2_R1.fastq.gz pass pass HLNTYAFXY_n01_surE_T2_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 788581.0 pass fail fail 45.0 50.9930192805 HLNTYAFXY_n01_surE_T2_R2.fastq.gz pass pass HLNTYAFXY_n01_surE_T2_R3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass pass 682628.0 pass fail warn 45.0 55.1023812352 HLNTYAFXY_n01_surE_T2_R3.fastq.gz pass pass HLNTYAFXY_n01_surE_T3_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1125376.0 pass fail warn 44.0 43.8047539083 HLNTYAFXY_n01_surE_T3_R1.fastq.gz pass pass HLNTYAFXY_n01_surE_T3_R2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass warn 901905.0 pass fail warn 45.0 47.0017143721 HLNTYAFXY_n01_surE_T3_R2.fastq.gz pass pass HLNTYAFXY_n01_surE_T3_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1130947.0 pass fail warn 45.0 45.5955513766 HLNTYAFXY_n01_surE_T3_R3.fastq.gz pass pass HLNTYAFXY_n01_surE_T4_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1032700.0 pass fail warn 45.0 47.5241224853 HLNTYAFXY_n01_surE_T4_R1.fastq.gz pass pass HLNTYAFXY_n01_surE_T4_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass pass 872565.0 pass fail warn 44.0 51.8915260464 HLNTYAFXY_n01_surE_T4_R2.fastq.gz pass pass HLNTYAFXY_n01_surE_T4_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1001575.0 pass fail fail 45.0 49.5366588156 HLNTYAFXY_n01_surE_T4_R3.fastq.gz pass pass HLNTYAFXY_n01_undetermined pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 17573636.0 pass pass warn 44.0 25.7279276053 HLNTYAFXY_n01_undetermined.fastq.gz pass pass HLNTYAFXY_n02_4_Fe500 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 25184638.0 pass fail warn 43.0 22.3312744047 HLNTYAFXY_n02_4_Fe500.fastq.gz pass pass HLNTYAFXY_n02_4_ctrl pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 25963222.0 pass fail warn 42.0 21.1474752521 HLNTYAFXY_n02_4_ctrl.fastq.gz pass pass HLNTYAFXY_n02_5_Fe500 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 18969958.0 pass fail warn 43.0 24.6362938333 HLNTYAFXY_n02_5_Fe500.fastq.gz pass pass HLNTYAFXY_n02_5_ctrl pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 26812181.0 pass fail warn 42.0 18.9716733921 HLNTYAFXY_n02_5_ctrl.fastq.gz pass pass HLNTYAFXY_n02_6_Fe500 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 19721193.0 pass fail warn 49.0 20.5739242623 HLNTYAFXY_n02_6_Fe500.fastq.gz pass pass HLNTYAFXY_n02_6_ctrl pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 35910299.0 pass fail warn 43.0 15.9344283993 HLNTYAFXY_n02_6_ctrl.fastq.gz pass pass HLNTYAFXY_n02_PY79_T2_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 995390.0 pass fail pass 45.0 50.0120082106 HLNTYAFXY_n02_PY79_T2_R1.fastq.gz pass pass HLNTYAFXY_n02_PY79_T2_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass warn 829646.0 pass fail warn 46.0 52.671719499 HLNTYAFXY_n02_PY79_T2_R2.fastq.gz pass pass HLNTYAFXY_n02_PY79_T2_R3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 835334.0 pass fail warn 45.0 54.8454546957 HLNTYAFXY_n02_PY79_T2_R3.fastq.gz pass pass HLNTYAFXY_n02_PY79_T3_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 617616.0 pass fail warn 45.0 53.7650316885 HLNTYAFXY_n02_PY79_T3_R1.fastq.gz pass pass HLNTYAFXY_n02_PY79_T3_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 598129.0 pass fail fail 45.0 53.1764659392 HLNTYAFXY_n02_PY79_T3_R2.fastq.gz pass pass HLNTYAFXY_n02_PY79_T3_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 854364.0 pass fail warn 45.0 49.5722261744 HLNTYAFXY_n02_PY79_T3_R3.fastq.gz pass pass HLNTYAFXY_n02_PY79_T4_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 906125.0 pass fail warn 45.0 52.2234721151 HLNTYAFXY_n02_PY79_T4_R1.fastq.gz pass pass HLNTYAFXY_n02_PY79_T4_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 765810.0 pass fail warn 44.0 53.4634233832 HLNTYAFXY_n02_PY79_T4_R2.fastq.gz pass pass HLNTYAFXY_n02_PY79_T4_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 992496.0 pass fail warn 45.0 48.8231669335 HLNTYAFXY_n02_PY79_T4_R3.fastq.gz pass pass HLNTYAFXY_n02_surD_T2_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 532968.0 pass fail warn 46.0 58.8621286845 HLNTYAFXY_n02_surD_T2_R1.fastq.gz pass pass HLNTYAFXY_n02_surD_T2_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 771091.0 pass fail warn 46.0 58.6811551502 HLNTYAFXY_n02_surD_T2_R2.fastq.gz pass pass HLNTYAFXY_n02_surD_T2_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1615611.0 pass fail warn 46.0 44.8884321852 HLNTYAFXY_n02_surD_T2_R3.fastq.gz pass pass HLNTYAFXY_n02_surD_T3_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 753955.0 pass fail warn 46.0 49.0736139643 HLNTYAFXY_n02_surD_T3_R1.fastq.gz pass pass HLNTYAFXY_n02_surD_T3_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 807207.0 pass fail fail 47.0 51.7265130167 HLNTYAFXY_n02_surD_T3_R2.fastq.gz pass pass HLNTYAFXY_n02_surD_T3_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1128160.0 pass fail warn 45.0 46.5990526198 HLNTYAFXY_n02_surD_T3_R3.fastq.gz pass pass HLNTYAFXY_n02_surD_T4_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1461025.0 pass fail warn 45.0 42.0444752632 HLNTYAFXY_n02_surD_T4_R1.fastq.gz pass pass HLNTYAFXY_n02_surD_T4_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 784979.0 pass fail warn 45.0 51.6646278369 HLNTYAFXY_n02_surD_T4_R2.fastq.gz pass pass HLNTYAFXY_n02_surD_T4_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 933151.0 pass fail warn 45.0 43.8226676183 HLNTYAFXY_n02_surD_T4_R3.fastq.gz pass pass HLNTYAFXY_n02_surE_T2_R1 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 692094.0 pass fail warn 45.0 53.3366492758 HLNTYAFXY_n02_surE_T2_R1.fastq.gz pass pass HLNTYAFXY_n02_surE_T2_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 788581.0 pass fail warn 46.0 54.2415619866 HLNTYAFXY_n02_surE_T2_R2.fastq.gz pass pass HLNTYAFXY_n02_surE_T2_R3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 warn pass pass 76.0 Conventional base calls pass pass 682628.0 pass fail pass 45.0 56.1734161809 HLNTYAFXY_n02_surE_T2_R3.fastq.gz pass pass HLNTYAFXY_n02_surE_T3_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1125376.0 pass fail warn 44.0 45.440603613 HLNTYAFXY_n02_surE_T3_R1.fastq.gz pass pass HLNTYAFXY_n02_surE_T3_R2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 901905.0 pass fail warn 45.0 49.0876572 HLNTYAFXY_n02_surE_T3_R2.fastq.gz pass pass HLNTYAFXY_n02_surE_T3_R3 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 1130947.0 pass fail warn 45.0 46.9167620859 HLNTYAFXY_n02_surE_T3_R3.fastq.gz pass pass HLNTYAFXY_n02_surE_T4_R1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1032700.0 pass fail warn 45.0 48.903667327 HLNTYAFXY_n02_surE_T4_R1.fastq.gz pass pass HLNTYAFXY_n02_surE_T4_R2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 872565.0 pass fail warn 45.0 55.4002461688 HLNTYAFXY_n02_surE_T4_R2.fastq.gz pass pass HLNTYAFXY_n02_surE_T4_R3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 1001575.0 pass fail warn 45.0 51.0061552408 HLNTYAFXY_n02_surE_T4_R3.fastq.gz pass pass HLNTYAFXY_n02_undetermined pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 17573636.0 pass warn fail 47.0 31.3609152459 HLNTYAFXY_n02_undetermined.fastq.gz pass pass