HLNTYAFXY_n02_surE_T3_R3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HLNTYAFXY_n02_surE_T3_R3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1130947
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTTTTTTACAAGGAAGGAGGGAAAAGGATGAAAAAGGCTTATAAGAAAC	2036	0.1800261197032222	No Hit
GCGAGGTTTCTTATAAGCTTTTTTCATTGAGCATCCCTCCTAAAATAGAG	1682	0.14872491814382105	No Hit
CGATTACTTAAGCGTCTACGAGCGTAGCCTGCATATTTATGGTTTCACTC	1666	0.1473101745705148	No Hit
GTTTCTTATAAGCTTTTTTCATTGAGCATCCCTCCTAAAATAGAGTACTA	1529	0.1351964327240799	No Hit
GAAAAAGGCTTATAAGAAACCTCGTCTTTTTGAACTGCGCCGTGCTGTAG	1465	0.12953745843085485	No Hit
GGCGTGATAGCCTCAAACGTTAATCGTTTTGGATAAGATTAATGACCGCC	1303	0.11521317975112892	No Hit
CAGGGATGGATCGAGCTTGAGCTGCGAGCCGAGAGGCGATCTCGTAAACA	1248	0.11034999871788864	No Hit
TCGAGCTTGAGCTGCGAGCCGAGAGGCGATCTCGTAAACACGCACTTAAA	1238	0.10946578398457223	No Hit
ACGGATTCGACAGGGATGGATCGAGCTTGAGCTGCGAGCCGAGAGGCGAT	1201	0.10619418947130149	No Hit
GATGGATCGAGCTTGAGCTGCGAGCCGAGAGGCGATCTCGTAAACACGCA	1161	0.10265733053803582	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGGGT	210	56.65754	37
CGGTGGT	255	53.537357	52
GTAGGAT	260	52.489227	32
GGTGGTC	265	51.52164	53
GATAGGG	240	49.573154	36
TAGGATA	280	48.73999	33
TCGGTGG	280	45.006683	51
TAGGGTG	275	43.26576	38
GTAGGGA	355	42.39129	19
GGGTGTA	285	41.749504	40
AGAGTGT	325	39.837975	27
GTGTAGA	310	39.513256	42
GGTCGCC	360	38.8981	56
GTGGTCG	370	37.846806	54
GGTGTAG	315	37.775036	41
GAGTGTA	355	35.485672	28
TAGGGAA	420	34.997456	20
CGTGTAG	435	33.79065	16
AGGATAG	345	33.47139	34
CTCTAGT	285	31.924679	6