HLNTYAFXY_n02_surE_T2_R2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HLNTYAFXY_n02_surE_T2_R2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	788581
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATC	7568	0.9596984964131775	Illumina Single End PCR Primer 1 (96% over 33bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1285	0.1629509207044045	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	815	0.10335019484364955	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGGTGG	1050	65.346596	51
GGTGGTC	1145	63.90754	53
GTGTAGA	1145	62.648655	42
GTGGTCG	1180	62.605392	54
CTCTATG	1105	62.070423	36
GGTCGCC	1185	62.041843	56
CGGTGGT	1135	61.998898	52
TAGATCT	1070	61.488304	45
GTAGATC	1100	61.394295	44
AGATCTC	1025	60.773552	46
TGTGTAG	1165	60.672073	41
ATCTCGG	1050	59.65986	48
GCCTCTA	1160	59.432873	34
CCTCTAT	1165	59.174038	35
GTGTGCC	1250	59.073257	30
GTGCCTC	1190	58.816814	32
CTCGGTG	1070	58.56329	50
TGGTCGC	1275	57.11688	55
TGTAGAT	1290	56.69176	43
AGAGTGT	1315	56.68195	27