HLNTYAFXY_n02_4_ctrl.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HLNTYAFXY_n02_4_ctrl.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25963222
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTTAAGAAGAAAGTTTTGTAAGAGTTTTCGTCTTGAAAGTTTGTTAAGA	117139	0.45117281668661924	No Hit
CCGCGGTTTCCTTCAACGATTTCAAAAGAAACAGCTTGGCCTTCTTCTAA	52990	0.2040963945075846	No Hit
CTCAACTTTACCGGATTTCAAAGCTCGAGCAGATACATATACTTTTTTAG	42349	0.16311149671639366	No Hit
TTTAAGAAGAAAGTTTTGTAAGAGTTTTCGTCTTGAAAGTTTGTTAAGAG	40562	0.15622868378970836	No Hit
ATTTTTTGTTAAAGCGATCAACACGACCATCAGCAGAAGCGAATTTTTGA	38047	0.14654190454482113	No Hit
TGAAGATTGACTTTTCGTCTTGATGATACTTTGGGCAAGGATAGTATATA	36149	0.13923156378665175	No Hit
GAAGATTTAACCTTAAGACACTGTGCTACAGGTTGTATCTTAGGAGGTGA	32653	0.12576636289594567	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	31717	0.1221612633439717	No Hit
CGCGGTTTCCTTCAACGATTTCAAAAGAAACAGCTTGGCCTTCTTCTAAA	29200	0.11246678089491358	No Hit
CTAACGTTCTGTAAGCCATGTTTTGTTCCATCGTACTGCAAACGGCTCAT	28951	0.11150773197563847	No Hit
GTCCGTTCACTTTTTTCGCTAGTCTTGATTTGTATCGAGCTGCGGTATTT	26464	0.10192879758914361	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGGCTA	3870	36.535297	33
ATAGTGT	3590	34.50856	39
TCGGTGG	3725	34.10904	51
GTAGGGA	5150	30.649023	19
TGGTCGC	4475	30.2705	55
TATAGTG	3975	30.02135	38
GGTGGCA	10095	29.610952	67
GTGGTCG	4660	29.444284	54
GGGTGGC	10640	28.127123	66
CTATAGT	4485	28.01265	37
GCTATAG	4595	27.340578	36
TAGTGTA	4685	26.74211	40
GTAGGCT	5265	26.523	32
CTCGGTG	4150	26.061356	50
TAAGAGT	35720	25.2786	20
CTAACGT	9770	24.555355	1
AGGCTAT	5965	23.936659	34
TGGGTGG	12615	23.863297	65
GAATAGT	37640	23.75981	55
AATAGTG	37770	23.64941	56