Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HLN27AFX2_n01_AH10355_4h_rep1 HLN27AFX2_n01_AH10355_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3667090.0 0.0 76.0 42.0 54.04850529041356 76.0 pass pass pass pass warn pass pass pass warn pass pass HLN27AFX2_n01_AH10355_4h_rep2 HLN27AFX2_n01_AH10355_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 3418914.0 0.0 76.0 42.0 54.87885374270397 76.0 pass pass pass pass warn pass pass pass warn pass pass HLN27AFX2_n01_AH10355_4h_rep3 HLN27AFX2_n01_AH10355_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 7105803.0 0.0 76.0 42.0 45.90651540405335 76.0 pass pass pass pass warn warn pass pass fail warn pass HLN27AFX2_n01_AH10423_4h_rep1 HLN27AFX2_n01_AH10423_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 2909358.0 0.0 76.0 42.0 57.056047796314125 76.0 pass pass pass pass warn pass pass pass warn pass pass HLN27AFX2_n01_AH10423_4h_rep2 HLN27AFX2_n01_AH10423_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 3311278.0 0.0 76.0 43.0 50.18475522185566 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_AH10423_4h_rep3 HLN27AFX2_n01_AH10423_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 9814739.0 0.0 76.0 43.0 42.91468382476717 76.0 pass pass pass pass warn warn pass pass fail pass pass HLN27AFX2_n01_AH10517-3h-antiRED1 HLN27AFX2_n01_AH10517-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 9516020.0 0.0 76.0 42.0 58.68591032969596 76.0 pass pass pass pass pass pass pass pass warn fail pass HLN27AFX2_n01_AH10517-3h-input HLN27AFX2_n01_AH10517-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 8039066.0 0.0 76.0 39.0 75.73720632939313 76.0 pass pass pass pass warn pass pass pass pass pass pass HLN27AFX2_n01_AH10819_4h_rep1 HLN27AFX2_n01_AH10819_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3542446.0 0.0 76.0 42.0 55.48965743108039 76.0 pass pass pass pass warn pass pass pass warn pass pass HLN27AFX2_n01_AH10819_4h_rep2 HLN27AFX2_n01_AH10819_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 2321059.0 0.0 76.0 42.0 60.65466928132067 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_AH10819_4h_rep3 HLN27AFX2_n01_AH10819_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 7658383.0 0.0 76.0 42.0 41.95509317592754 76.0 pass pass pass pass warn pass pass pass fail warn pass HLN27AFX2_n01_AH10820_4h_rep1 HLN27AFX2_n01_AH10820_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 7404160.0 0.0 76.0 42.0 45.69664898088607 76.0 pass pass pass pass warn pass pass pass fail pass pass HLN27AFX2_n01_AH10820_4h_rep2 HLN27AFX2_n01_AH10820_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 5329178.0 0.0 76.0 43.0 46.47178667419488 76.0 pass pass pass pass fail pass pass pass fail fail pass HLN27AFX2_n01_AH10820_4h_rep3 HLN27AFX2_n01_AH10820_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 8622728.0 0.0 76.0 43.0 38.92280269285634 76.0 pass pass pass pass fail fail pass pass fail fail pass HLN27AFX2_n01_AH10961-3h-antiRED1 HLN27AFX2_n01_AH10961-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 13677807.0 0.0 76.0 46.0 40.39976710652212 76.0 pass pass pass pass pass pass pass pass fail warn pass HLN27AFX2_n01_AH10961-3h-input HLN27AFX2_n01_AH10961-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 15643677.0 0.0 76.0 39.0 64.32245759521709 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_AH10962-3h-antiRED1 HLN27AFX2_n01_AH10962-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 10097841.0 0.0 76.0 44.0 46.617755163378405 76.0 pass pass pass pass warn pass pass pass fail warn pass HLN27AFX2_n01_AH10962-3h-input HLN27AFX2_n01_AH10962-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 12162331.0 0.0 76.0 39.0 68.54254008294522 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_AH10965-3h-antiRED1 HLN27AFX2_n01_AH10965-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 7945601.0 0.0 76.0 41.0 66.09217373985463 76.0 pass pass pass pass pass pass pass pass warn warn pass HLN27AFX2_n01_AH10965-3h-input HLN27AFX2_n01_AH10965-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 12493219.0 0.0 76.0 39.0 68.09068253580811 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_AH9866-3h-antiRED1 HLN27AFX2_n01_AH9866-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 9917437.0 0.0 76.0 43.0 54.21230988328012 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_AH9866-3h-input HLN27AFX2_n01_AH9866-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 10449757.0 0.0 76.0 39.0 69.86597485175278 76.0 pass pass pass pass warn pass pass pass warn warn pass HLN27AFX2_n01_undetermined HLN27AFX2_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 4187667.0 0.0 76.0 42.0 59.26111144018652 76.0 pass pass pass pass pass warn pass pass warn warn pass HLN27AFX2_n02_AH10355_4h_rep1 HLN27AFX2_n02_AH10355_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3667090.0 0.0 76.0 41.0 47.99578846493061 76.0 pass pass pass pass fail pass pass pass fail warn pass HLN27AFX2_n02_AH10355_4h_rep2 HLN27AFX2_n02_AH10355_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 3418914.0 0.0 76.0 42.0 49.38221212794323 76.0 pass pass pass pass warn warn pass pass fail warn pass HLN27AFX2_n02_AH10355_4h_rep3 HLN27AFX2_n02_AH10355_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 7105803.0 0.0 76.0 42.0 42.671568506780474 76.0 pass pass pass pass warn fail pass pass fail warn pass HLN27AFX2_n02_AH10423_4h_rep1 HLN27AFX2_n02_AH10423_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 2909358.0 0.0 76.0 42.0 50.828874637570365 76.0 pass pass pass pass fail warn pass pass warn warn pass HLN27AFX2_n02_AH10423_4h_rep2 HLN27AFX2_n02_AH10423_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 3311278.0 0.0 76.0 43.0 46.953029390497434 76.0 pass pass pass pass warn fail pass pass fail warn pass HLN27AFX2_n02_AH10423_4h_rep3 HLN27AFX2_n02_AH10423_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 9814739.0 0.0 76.0 43.0 39.76712617121374 76.0 pass pass pass pass warn fail pass pass fail warn pass HLN27AFX2_n02_AH10517-3h-antiRED1 HLN27AFX2_n02_AH10517-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 9516020.0 0.0 76.0 43.0 61.2498136206553 76.0 pass pass pass pass warn warn pass pass warn warn pass HLN27AFX2_n02_AH10517-3h-input HLN27AFX2_n02_AH10517-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 8039066.0 0.0 76.0 39.0 76.90651136922837 76.0 pass pass pass pass pass warn pass pass pass warn pass HLN27AFX2_n02_AH10819_4h_rep1 HLN27AFX2_n02_AH10819_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3542446.0 0.0 76.0 41.0 48.47319751576503 76.0 pass pass pass pass fail pass pass pass fail warn pass HLN27AFX2_n02_AH10819_4h_rep2 HLN27AFX2_n02_AH10819_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 2321059.0 0.0 76.0 42.0 53.2083610711035 76.0 pass pass pass pass fail pass pass pass warn warn pass HLN27AFX2_n02_AH10819_4h_rep3 HLN27AFX2_n02_AH10819_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 7658383.0 0.0 76.0 42.0 38.44390250609982 76.0 pass pass pass pass fail warn pass pass fail warn pass HLN27AFX2_n02_AH10820_4h_rep1 HLN27AFX2_n02_AH10820_4h_rep1.fastq.gz Conventional base calls Sanger / Illumina 1.9 7404160.0 0.0 76.0 41.0 38.00663768832433 76.0 pass pass pass pass fail pass pass pass fail warn pass HLN27AFX2_n02_AH10820_4h_rep2 HLN27AFX2_n02_AH10820_4h_rep2.fastq.gz Conventional base calls Sanger / Illumina 1.9 5329178.0 0.0 76.0 46.0 46.39666028032921 76.0 pass pass pass pass fail fail pass pass fail fail pass HLN27AFX2_n02_AH10820_4h_rep3 HLN27AFX2_n02_AH10820_4h_rep3.fastq.gz Conventional base calls Sanger / Illumina 1.9 8622728.0 0.0 76.0 46.0 39.56146519561664 76.0 pass pass pass pass fail fail pass pass fail fail pass HLN27AFX2_n02_AH10961-3h-antiRED1 HLN27AFX2_n02_AH10961-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 13677807.0 0.0 76.0 46.0 43.71521233687392 76.0 pass pass pass pass pass warn pass pass fail warn pass HLN27AFX2_n02_AH10961-3h-input HLN27AFX2_n02_AH10961-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 15643677.0 0.0 76.0 39.0 66.22613753747521 76.0 pass pass pass pass warn warn pass pass warn warn pass HLN27AFX2_n02_AH10962-3h-antiRED1 HLN27AFX2_n02_AH10962-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 10097841.0 0.0 76.0 45.0 49.44148203938453 76.0 pass pass pass pass warn warn pass pass fail warn pass HLN27AFX2_n02_AH10962-3h-input HLN27AFX2_n02_AH10962-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 12162331.0 0.0 76.0 39.0 70.24975589909891 76.0 pass pass pass pass warn warn pass pass pass warn pass HLN27AFX2_n02_AH10965-3h-antiRED1 HLN27AFX2_n02_AH10965-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 7945601.0 0.0 76.0 42.0 68.06985495922133 76.0 pass pass pass pass pass warn pass pass warn warn pass HLN27AFX2_n02_AH10965-3h-input HLN27AFX2_n02_AH10965-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 12493219.0 0.0 76.0 40.0 73.31244657945693 76.0 pass pass pass pass warn warn pass pass pass warn pass HLN27AFX2_n02_AH9866-3h-antiRED1 HLN27AFX2_n02_AH9866-3h-antiRED1.fastq.gz Conventional base calls Sanger / Illumina 1.9 9917437.0 0.0 76.0 43.0 56.59518195720552 76.0 pass pass pass pass warn warn pass pass warn warn pass HLN27AFX2_n02_AH9866-3h-input HLN27AFX2_n02_AH9866-3h-input.fastq.gz Conventional base calls Sanger / Illumina 1.9 10449757.0 0.0 76.0 39.0 71.51797719600964 76.0 pass pass pass pass warn warn pass pass pass warn pass HLN27AFX2_n02_undetermined HLN27AFX2_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 4187667.0 0.0 76.0 46.0 58.23636116962215 76.0 pass pass pass pass warn fail pass pass warn fail pass