[2021-02-27 03:32:27,017] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2021-02-27 03:32:27,017] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2021-02-27 03:32:27,017] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml
[2021-02-27 03:32:27,018] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml
[2021-02-27 03:32:27,018] multiqc [DEBUG ] New config 'report_section_order': {'demux_report': {'after': 'run_stats'}}
[2021-02-27 03:32:27,018] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HLN27AFX2/merged
[2021-02-27 03:32:28,458] multiqc [DEBUG ] Latest MultiQC version is v1.9
[2021-02-27 03:32:28,458] multiqc [INFO ] This is MultiQC v1.9
[2021-02-27 03:32:28,458] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HLN27AFX2/merged
[2021-02-27 03:32:28,458] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HLN27AFX2/merged
[2021-02-27 03:32:28,458] multiqc [INFO ] Template : default
[2021-02-27 03:32:28,458] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode]
[2021-02-27 03:32:28,458] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HLN27AFX2/merged
[2021-02-27 03:32:28,459] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2021-02-27 03:32:28,459] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-3200270/tmp3jzlb7tt
[2021-02-27 03:32:28,564] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10355_4h_rep2_fastqc.html
[2021-02-27 03:32:28,567] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10355_4h_rep2_fastqc.html
[2021-02-27 03:32:28,609] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10819_4h_rep2_fastqc.html
[2021-02-27 03:32:28,611] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10819_4h_rep2_fastqc.html
[2021-02-27 03:32:28,651] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10820_4h_rep1_fastqc.html
[2021-02-27 03:32:28,652] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10820_4h_rep1_fastqc.html
[2021-02-27 03:32:28,691] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2021-02-27 03:32:28,692] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2021-02-27 03:32:28,795] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10355_4h_rep1_fastqc.html
[2021-02-27 03:32:28,797] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10355_4h_rep1_fastqc.html
[2021-02-27 03:32:28,836] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10820_4h_rep1_fastqc.html
[2021-02-27 03:32:28,838] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10820_4h_rep1_fastqc.html
[2021-02-27 03:32:28,877] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10355_4h_rep3_fastqc.html
[2021-02-27 03:32:28,878] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10355_4h_rep3_fastqc.html
[2021-02-27 03:32:28,917] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10819_4h_rep2_fastqc.html
[2021-02-27 03:32:28,919] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10819_4h_rep2_fastqc.html
[2021-02-27 03:32:28,958] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10517-3h-antiRED1_fastqc.html
[2021-02-27 03:32:28,960] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10517-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,000] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH9866-3h-input_fastqc.html
[2021-02-27 03:32:29,001] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH9866-3h-input_fastqc.html
[2021-02-27 03:32:29,040] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10355_4h_rep3_fastqc.html
[2021-02-27 03:32:29,041] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10355_4h_rep3_fastqc.html
[2021-02-27 03:32:29,081] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10820_4h_rep2_fastqc.html
[2021-02-27 03:32:29,083] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10820_4h_rep2_fastqc.html
[2021-02-27 03:32:29,126] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10517-3h-input_fastqc.html
[2021-02-27 03:32:29,128] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10517-3h-input_fastqc.html
[2021-02-27 03:32:29,167] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10820_4h_rep3_fastqc.html
[2021-02-27 03:32:29,168] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10820_4h_rep3_fastqc.html
[2021-02-27 03:32:29,211] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10961-3h-input_fastqc.html
[2021-02-27 03:32:29,213] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10961-3h-input_fastqc.html
[2021-02-27 03:32:29,251] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10965-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,252] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10965-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,291] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10962-3h-input_fastqc.html
[2021-02-27 03:32:29,293] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10962-3h-input_fastqc.html
[2021-02-27 03:32:29,330] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10962-3h-input_fastqc.html
[2021-02-27 03:32:29,332] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10962-3h-input_fastqc.html
[2021-02-27 03:32:29,370] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10961-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,372] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10961-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,410] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_undetermined_fastqc.html
[2021-02-27 03:32:29,412] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_undetermined_fastqc.html
[2021-02-27 03:32:29,451] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10423_4h_rep3_fastqc.html
[2021-02-27 03:32:29,453] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10423_4h_rep3_fastqc.html
[2021-02-27 03:32:29,493] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10962-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,494] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10962-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,534] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10819_4h_rep3_fastqc.html
[2021-02-27 03:32:29,535] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10819_4h_rep3_fastqc.html
[2021-02-27 03:32:29,575] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10517-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,577] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10517-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,615] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10423_4h_rep1_fastqc.html
[2021-02-27 03:32:29,616] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10423_4h_rep1_fastqc.html
[2021-02-27 03:32:29,657] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10517-3h-input_fastqc.html
[2021-02-27 03:32:29,659] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10517-3h-input_fastqc.html
[2021-02-27 03:32:29,698] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH9866-3h-input_fastqc.html
[2021-02-27 03:32:29,699] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH9866-3h-input_fastqc.html
[2021-02-27 03:32:29,738] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10962-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,739] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10962-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,778] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10965-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,779] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10965-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,817] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10961-3h-input_fastqc.html
[2021-02-27 03:32:29,819] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10961-3h-input_fastqc.html
[2021-02-27 03:32:29,856] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10819_4h_rep3_fastqc.html
[2021-02-27 03:32:29,858] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10819_4h_rep3_fastqc.html
[2021-02-27 03:32:29,898] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10819_4h_rep1_fastqc.html
[2021-02-27 03:32:29,899] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10819_4h_rep1_fastqc.html
[2021-02-27 03:32:29,939] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH9866-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH9866-3h-antiRED1_fastqc.html
[2021-02-27 03:32:29,978] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10423_4h_rep2_fastqc.html
[2021-02-27 03:32:29,980] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10423_4h_rep2_fastqc.html
[2021-02-27 03:32:30,020] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10965-3h-input_fastqc.html
[2021-02-27 03:32:30,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10965-3h-input_fastqc.html
[2021-02-27 03:32:30,061] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10965-3h-input_fastqc.html
[2021-02-27 03:32:30,063] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10965-3h-input_fastqc.html
[2021-02-27 03:32:30,101] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10355_4h_rep2_fastqc.html
[2021-02-27 03:32:30,103] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10355_4h_rep2_fastqc.html
[2021-02-27 03:32:30,142] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_undetermined_fastqc.html
[2021-02-27 03:32:30,143] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_undetermined_fastqc.html
[2021-02-27 03:32:30,182] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH9866-3h-antiRED1_fastqc.html
[2021-02-27 03:32:30,184] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH9866-3h-antiRED1_fastqc.html
[2021-02-27 03:32:30,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10820_4h_rep2_fastqc.html
[2021-02-27 03:32:30,223] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10820_4h_rep2_fastqc.html
[2021-02-27 03:32:30,262] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10423_4h_rep1_fastqc.html
[2021-02-27 03:32:30,264] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10423_4h_rep1_fastqc.html
[2021-02-27 03:32:30,303] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10423_4h_rep3_fastqc.html
[2021-02-27 03:32:30,304] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10423_4h_rep3_fastqc.html
[2021-02-27 03:32:30,343] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10355_4h_rep1_fastqc.html
[2021-02-27 03:32:30,345] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10355_4h_rep1_fastqc.html
[2021-02-27 03:32:30,384] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10819_4h_rep1_fastqc.html
[2021-02-27 03:32:30,386] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10819_4h_rep1_fastqc.html
[2021-02-27 03:32:30,425] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10961-3h-antiRED1_fastqc.html
[2021-02-27 03:32:30,427] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10961-3h-antiRED1_fastqc.html
[2021-02-27 03:32:30,467] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10820_4h_rep3_fastqc.html
[2021-02-27 03:32:30,468] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n02_AH10820_4h_rep3_fastqc.html
[2021-02-27 03:32:30,508] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10423_4h_rep2_fastqc.html
[2021-02-27 03:32:30,510] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLN27AFX2_n01_AH10423_4h_rep2_fastqc.html
[2021-02-27 03:32:31,003] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2
[2021-02-27 03:32:31,006] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2
[2021-02-27 03:32:31,023] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table)
[2021-02-27 03:32:31,035] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 23 samples (table)
[2021-02-27 03:32:31,036] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table)
[2021-02-27 03:32:31,042] multiqc [DEBUG ] No samples found: conpair
[2021-02-27 03:32:31,047] multiqc [DEBUG ] No samples found: peddy
[2021-02-27 03:32:31,053] multiqc [DEBUG ] No samples found: somalier
[2021-02-27 03:32:31,060] multiqc [DEBUG ] No samples found: methylQA
[2021-02-27 03:32:31,071] multiqc [DEBUG ] No samples found: mosdepth
[2021-02-27 03:32:31,075] multiqc [DEBUG ] No samples found: phantompeakqualtools
[2021-02-27 03:32:31,080] multiqc [DEBUG ] No samples found: qualimap
[2021-02-27 03:32:31,084] multiqc [DEBUG ] No samples found: preseq
[2021-02-27 03:32:31,089] multiqc [DEBUG ] No samples found: quast
[2021-02-27 03:32:31,094] multiqc [DEBUG ] No samples found: qorts
[2021-02-27 03:32:31,100] multiqc [DEBUG ] No samples found: rna_seqc
[2021-02-27 03:32:31,105] multiqc [DEBUG ] No samples found: rockhopper
[2021-02-27 03:32:31,112] multiqc [DEBUG ] No samples found: rsem
[2021-02-27 03:32:31,129] multiqc [DEBUG ] No samples found: rseqc
[2021-02-27 03:32:31,135] multiqc [DEBUG ] No samples found: busco
[2021-02-27 03:32:31,140] multiqc [DEBUG ] No samples found: goleft_indexcov
[2021-02-27 03:32:31,145] multiqc [DEBUG ] No samples found: disambiguate
[2021-02-27 03:32:31,152] multiqc [DEBUG ] No samples found: supernova
[2021-02-27 03:32:31,171] multiqc [DEBUG ] No samples found: deeptools
[2021-02-27 03:32:31,176] multiqc [DEBUG ] No samples found: sargasso
[2021-02-27 03:32:31,181] multiqc [DEBUG ] No samples found: verifybamid
[2021-02-27 03:32:31,188] multiqc [DEBUG ] No samples found: mirtrace
[2021-02-27 03:32:31,194] multiqc [DEBUG ] No samples found: happy
[2021-02-27 03:32:31,199] multiqc [DEBUG ] No samples found: mirtop
[2021-02-27 03:32:31,207] multiqc [DEBUG ] No samples found: homer
[2021-02-27 03:32:31,211] multiqc [DEBUG ] No samples found: macs2
[2021-02-27 03:32:31,216] multiqc [DEBUG ] No samples found: theta2
[2021-02-27 03:32:31,222] multiqc [DEBUG ] No samples found: snpeff
[2021-02-27 03:32:31,230] multiqc [DEBUG ] No samples found: gatk
[2021-02-27 03:32:31,235] multiqc [DEBUG ] No samples found: htseq
[2021-02-27 03:32:31,243] multiqc [DEBUG ] No samples found: bcftools
[2021-02-27 03:32:31,248] multiqc [DEBUG ] No samples found: featureCounts
[2021-02-27 03:32:31,256] multiqc [DEBUG ] No samples found: fgbio
[2021-02-27 03:32:31,272] multiqc [DEBUG ] No samples found: dragen
[2021-02-27 03:32:31,276] multiqc [DEBUG ] No samples found: dedup
[2021-02-27 03:32:31,281] multiqc [DEBUG ] No samples found: damageprofiler
[2021-02-27 03:32:31,323] multiqc [DEBUG ] No samples found: biobambam2
[2021-02-27 03:32:31,327] multiqc [DEBUG ] No samples found: mtnucratio
[2021-02-27 03:32:31,330] multiqc [DEBUG ] No samples found: picard
[2021-02-27 03:32:31,336] multiqc [DEBUG ] No samples found: prokka
[2021-02-27 03:32:31,339] multiqc [DEBUG ] No samples found: samblaster
[2021-02-27 03:32:31,347] multiqc [DEBUG ] No samples found: samtools
[2021-02-27 03:32:31,357] multiqc [DEBUG ] No samples found: sexdeterrmine
[2021-02-27 03:32:31,362] multiqc [DEBUG ] No samples found: bamtools
[2021-02-27 03:32:31,367] multiqc [DEBUG ] No samples found: jellyfish
[2021-02-27 03:32:31,379] multiqc [DEBUG ] No samples found: vcftools
[2021-02-27 03:32:31,383] multiqc [DEBUG ] No samples found: longranger
[2021-02-27 03:32:31,389] multiqc [DEBUG ] No samples found: stacks
[2021-02-27 03:32:31,398] multiqc [DEBUG ] No samples found: varscan2
[2021-02-27 03:32:31,424] multiqc [DEBUG ] No samples found: bbmap
[2021-02-27 03:32:31,431] multiqc [DEBUG ] No samples found: bismark
[2021-02-27 03:32:31,437] multiqc [DEBUG ] No samples found: biscuit
[2021-02-27 03:32:31,443] multiqc [DEBUG ] No samples found: hicexplorer
[2021-02-27 03:32:31,449] multiqc [DEBUG ] No samples found: hicup
[2021-02-27 03:32:31,455] multiqc [DEBUG ] No samples found: hicpro
[2021-02-27 03:32:31,460] multiqc [DEBUG ] No samples found: salmon
[2021-02-27 03:32:31,464] multiqc [DEBUG ] No samples found: kallisto
[2021-02-27 03:32:31,470] multiqc [DEBUG ] No samples found: slamdunk
[2021-02-27 03:32:31,476] multiqc [DEBUG ] No samples found: star
[2021-02-27 03:32:31,481] multiqc [DEBUG ] No samples found: hisat2
[2021-02-27 03:32:31,487] multiqc [DEBUG ] No samples found: tophat
[2021-02-27 03:32:31,492] multiqc [DEBUG ] No samples found: bowtie2
[2021-02-27 03:32:31,497] multiqc [DEBUG ] No samples found: bowtie1
[2021-02-27 03:32:31,503] multiqc [DEBUG ] No samples found: snpsplit
[2021-02-27 03:32:31,507] multiqc [DEBUG ] No samples found: kat
[2021-02-27 03:32:31,513] multiqc [DEBUG ] No samples found: leehom
[2021-02-27 03:32:31,517] multiqc [DEBUG ] No samples found: adapterRemoval
[2021-02-27 03:32:31,521] multiqc [DEBUG ] No samples found: clipandmerge
[2021-02-27 03:32:31,527] multiqc [DEBUG ] No samples found: cutadapt
[2021-02-27 03:32:31,530] multiqc [DEBUG ] No samples found: flexbar
[2021-02-27 03:32:31,536] multiqc [DEBUG ] No samples found: kaiju
[2021-02-27 03:32:31,542] multiqc [DEBUG ] No samples found: kraken
[2021-02-27 03:32:31,548] multiqc [DEBUG ] No samples found: malt
[2021-02-27 03:32:31,554] multiqc [DEBUG ] No samples found: trimmomatic
[2021-02-27 03:32:31,559] multiqc [DEBUG ] No samples found: sickle
[2021-02-27 03:32:31,570] multiqc [DEBUG ] No samples found: skewer
[2021-02-27 03:32:31,574] multiqc [DEBUG ] No samples found: sortmerna
[2021-02-27 03:32:31,579] multiqc [DEBUG ] No samples found: biobloomtools
[2021-02-27 03:32:31,584] multiqc [DEBUG ] No samples found: fastq_screen
[2021-02-27 03:32:31,589] multiqc [DEBUG ] No samples found: afterqc
[2021-02-27 03:32:31,593] multiqc [DEBUG ] No samples found: fastp
[2021-02-27 03:32:32,697] multiqc.modules.fastqc.fastqc [INFO ] Found 46 reports
[2021-02-27 03:32:33,624] multiqc [DEBUG ] No samples found: pycoqc
[2021-02-27 03:32:33,630] multiqc [DEBUG ] No samples found: minionqc
[2021-02-27 03:32:33,636] multiqc [DEBUG ] No samples found: multivcfanalyzer
[2021-02-27 03:32:33,642] multiqc [DEBUG ] No samples found: clusterflow
[2021-02-27 03:32:33,647] multiqc [DEBUG ] No samples found: bcl2fastq
[2021-02-27 03:32:33,654] multiqc [DEBUG ] No samples found: interop
[2021-02-27 03:32:33,659] multiqc [DEBUG ] No samples found: ivar
[2021-02-27 03:32:33,665] multiqc [DEBUG ] No samples found: flash
[2021-02-27 03:32:33,669] multiqc [DEBUG ] No samples found: seqyclean
[2021-02-27 03:32:33,669] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'.
[2021-02-27 03:32:33,669] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2021-02-27 03:32:33,669] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2021-02-27 03:32:33,669] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2021-02-27 03:32:33,722] multiqc [INFO ] Compressing plot data
[2021-02-27 03:32:34,521] multiqc [INFO ] Report : multiqc_report.html
[2021-02-27 03:32:34,521] multiqc [INFO ] Data : multiqc_data
[2021-02-27 03:32:34,521] multiqc [DEBUG ] Moving data file from '/state/partition1/job-3200270/tmp3jzlb7tt/multiqc_data' to '/scratch/gencore/logs/html/HLN27AFX2/merged/multiqc_data'
[2021-02-27 03:32:34,640] multiqc [INFO ] MultiQC complete