Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HLMNMAFX2_n01_undetermined HLMNMAFX2_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 10854990.0 0.0 76.0 46.0 23.70606646896212 76.0 pass pass pass pass pass fail pass pass fail fail pass HLMNMAFX2_n01_vk12-1 HLMNMAFX2_n01_vk12-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 4406170.0 0.0 76.0 42.0 33.01593501892532 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n01_vk12-10 HLMNMAFX2_n01_vk12-10.fastq.gz Conventional base calls Sanger / Illumina 1.9 6222133.0 0.0 76.0 41.0 55.077768813639 76.0 pass pass pass pass warn fail pass pass warn pass warn HLMNMAFX2_n01_vk12-11 HLMNMAFX2_n01_vk12-11.fastq.gz Conventional base calls Sanger / Illumina 1.9 4046977.0 0.0 76.0 36.0 31.031678509386047 76.0 pass pass pass pass warn warn pass pass fail warn fail HLMNMAFX2_n01_vk12-12 HLMNMAFX2_n01_vk12-12.fastq.gz Conventional base calls Sanger / Illumina 1.9 5000712.0 0.0 76.0 40.0 47.83999991711242 76.0 pass pass pass pass fail fail pass pass fail pass pass HLMNMAFX2_n01_vk12-13 HLMNMAFX2_n01_vk12-13.fastq.gz Conventional base calls Sanger / Illumina 1.9 3859424.0 0.0 76.0 39.0 39.122648974020144 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-14 HLMNMAFX2_n01_vk12-14.fastq.gz Conventional base calls Sanger / Illumina 1.9 4806855.0 0.0 76.0 40.0 47.76918727158245 76.0 pass pass pass pass fail fail pass pass fail pass warn HLMNMAFX2_n01_vk12-15 HLMNMAFX2_n01_vk12-15.fastq.gz Conventional base calls Sanger / Illumina 1.9 3904927.0 0.0 76.0 41.0 35.40955349889826 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-16 HLMNMAFX2_n01_vk12-16.fastq.gz Conventional base calls Sanger / Illumina 1.9 4632243.0 0.0 76.0 40.0 39.39793918327228 76.0 pass pass pass pass warn warn pass pass fail warn fail HLMNMAFX2_n01_vk12-17 HLMNMAFX2_n01_vk12-17.fastq.gz Conventional base calls Sanger / Illumina 1.9 2000561.0 0.0 76.0 41.0 27.33532689777569 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-18 HLMNMAFX2_n01_vk12-18.fastq.gz Conventional base calls Sanger / Illumina 1.9 5336768.0 0.0 76.0 40.0 26.718203553405555 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-19 HLMNMAFX2_n01_vk12-19.fastq.gz Conventional base calls Sanger / Illumina 1.9 5149334.0 0.0 76.0 40.0 35.182945498264736 76.0 pass pass pass pass fail warn pass pass fail warn warn HLMNMAFX2_n01_vk12-2 HLMNMAFX2_n01_vk12-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 5849720.0 0.0 76.0 41.0 32.08751585349537 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-20 HLMNMAFX2_n01_vk12-20.fastq.gz Conventional base calls Sanger / Illumina 1.9 2789064.0 0.0 76.0 42.0 24.684375440618687 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-3 HLMNMAFX2_n01_vk12-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 3825768.0 0.0 76.0 43.0 32.25121787482211 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n01_vk12-4 HLMNMAFX2_n01_vk12-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 6309708.0 0.0 76.0 40.0 34.7600773370415 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-5 HLMNMAFX2_n01_vk12-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 6024260.0 0.0 76.0 40.0 30.204819671789323 76.0 pass pass pass pass warn warn pass pass fail warn fail HLMNMAFX2_n01_vk12-6 HLMNMAFX2_n01_vk12-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 5718762.0 0.0 76.0 39.0 32.882950189418416 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n01_vk12-7 HLMNMAFX2_n01_vk12-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 7805085.0 0.0 76.0 40.0 33.751317544605875 76.0 pass pass pass pass warn warn pass pass fail warn fail HLMNMAFX2_n01_vk12-8 HLMNMAFX2_n01_vk12-8.fastq.gz Conventional base calls Sanger / Illumina 1.9 2996024.0 0.0 76.0 49.0 30.965703411880135 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n01_vk12-9 HLMNMAFX2_n01_vk12-9.fastq.gz Conventional base calls Sanger / Illumina 1.9 6195704.0 0.0 76.0 46.0 40.95209289027534 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_undetermined HLMNMAFX2_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 10854990.0 0.0 76.0 47.0 27.10046637799665 76.0 pass pass pass pass warn fail pass pass fail fail pass HLMNMAFX2_n02_vk12-1 HLMNMAFX2_n02_vk12-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 4406170.0 0.0 76.0 41.0 35.8048996865451 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_vk12-10 HLMNMAFX2_n02_vk12-10.fastq.gz Conventional base calls Sanger / Illumina 1.9 6222133.0 0.0 76.0 40.0 56.53942915337053 76.0 pass pass pass pass fail fail pass pass warn warn warn HLMNMAFX2_n02_vk12-11 HLMNMAFX2_n02_vk12-11.fastq.gz Conventional base calls Sanger / Illumina 1.9 4046977.0 0.0 76.0 40.0 41.87519258744849 76.0 pass pass pass pass fail warn pass pass fail warn warn HLMNMAFX2_n02_vk12-12 HLMNMAFX2_n02_vk12-12.fastq.gz Conventional base calls Sanger / Illumina 1.9 5000712.0 0.0 76.0 41.0 48.36311793738437 76.0 pass pass pass pass fail fail pass pass fail warn warn HLMNMAFX2_n02_vk12-13 HLMNMAFX2_n02_vk12-13.fastq.gz Conventional base calls Sanger / Illumina 1.9 3859424.0 0.0 76.0 40.0 40.46296855631143 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-14 HLMNMAFX2_n02_vk12-14.fastq.gz Conventional base calls Sanger / Illumina 1.9 4806855.0 0.0 76.0 40.0 49.12172885435209 76.0 pass pass pass pass fail fail pass pass fail warn warn HLMNMAFX2_n02_vk12-15 HLMNMAFX2_n02_vk12-15.fastq.gz Conventional base calls Sanger / Illumina 1.9 3904927.0 0.0 76.0 41.0 37.95527081437498 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_vk12-16 HLMNMAFX2_n02_vk12-16.fastq.gz Conventional base calls Sanger / Illumina 1.9 4632243.0 0.0 76.0 40.0 40.61386672420721 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-17 HLMNMAFX2_n02_vk12-17.fastq.gz Conventional base calls Sanger / Illumina 1.9 2000561.0 0.0 76.0 41.0 33.008172609401285 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-18 HLMNMAFX2_n02_vk12-18.fastq.gz Conventional base calls Sanger / Illumina 1.9 5336768.0 0.0 76.0 41.0 29.694711332505285 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-19 HLMNMAFX2_n02_vk12-19.fastq.gz Conventional base calls Sanger / Illumina 1.9 5149334.0 0.0 76.0 40.0 37.628729695209245 76.0 pass pass pass pass fail warn pass pass fail warn warn HLMNMAFX2_n02_vk12-2 HLMNMAFX2_n02_vk12-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 5849720.0 0.0 76.0 41.0 34.555337055590385 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-20 HLMNMAFX2_n02_vk12-20.fastq.gz Conventional base calls Sanger / Illumina 1.9 2789064.0 0.0 76.0 42.0 30.96175816446066 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-3 HLMNMAFX2_n02_vk12-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 3825768.0 0.0 76.0 42.0 35.62779022543343 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_vk12-4 HLMNMAFX2_n02_vk12-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 6309708.0 0.0 76.0 40.0 36.89266021442596 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-5 HLMNMAFX2_n02_vk12-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 6024260.0 0.0 76.0 40.0 32.194602503308836 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_vk12-6 HLMNMAFX2_n02_vk12-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 5718762.0 0.0 76.0 40.0 36.955037555185925 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_vk12-7 HLMNMAFX2_n02_vk12-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 7805085.0 0.0 76.0 39.0 36.02814044781948 76.0 pass pass pass pass fail warn pass pass fail warn fail HLMNMAFX2_n02_vk12-8 HLMNMAFX2_n02_vk12-8.fastq.gz Conventional base calls Sanger / Illumina 1.9 2996024.0 0.0 76.0 45.0 35.14836606708494 76.0 pass pass pass pass fail fail pass pass fail warn fail HLMNMAFX2_n02_vk12-9 HLMNMAFX2_n02_vk12-9.fastq.gz Conventional base calls Sanger / Illumina 1.9 6195704.0 0.0 76.0 45.0 47.92329819869099 76.0 pass pass pass pass fail warn pass pass fail warn fail