[2025-01-28 15:06:19,387] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2025-01-28 15:06:19,387] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2025-01-28 15:06:19,388] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2025-01-28 15:06:19,390] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2025-01-28 15:06:19,390] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2025-01-28 15:06:19,390] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2025-01-28 15:06:19,414] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2025-01-28 15:06:19,414] multiqc [INFO ] This is MultiQC v1.9 [2025-01-28 15:06:19,414] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2025-01-28 15:06:19,414] multiqc [DEBUG ] Working dir : /scratch/gencore/GENEFLOW/work/nf/27/2c331681b937fcb29e303cdca2aa3f/merged [2025-01-28 15:06:19,414] multiqc [INFO ] Template : default [2025-01-28 15:06:19,414] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2025-01-28 15:06:19,414] multiqc [INFO ] Searching : /scratch/gencore/GENEFLOW/work/nf/27/2c331681b937fcb29e303cdca2aa3f/merged [2025-01-28 15:06:19,415] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2025-01-28 15:06:19,415] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-56553407/tmpwj4h189j [2025-01-28 15:06:19,525] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:19,528] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:19,528] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search 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15:06:19,613] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_0.05.2_fastqc.html [2025-01-28 15:06:19,613] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_0.05.2_fastqc.html [2025-01-28 15:06:19,613] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_0.05.2_fastqc.html [2025-01-28 15:06:19,613] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_0.05.2_fastqc.html [2025-01-28 15:06:19,613] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_0.05.2_fastqc.html [2025-01-28 15:06:19,613] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it 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15:06:25,321] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_Casp_0h.2_fastqc.html [2025-01-28 15:06:25,321] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_Casp_0h.2_fastqc.html [2025-01-28 15:06:25,321] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_Casp_0h.2_fastqc.html [2025-01-28 15:06:25,399] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_48h_Casp_h48_I.2_fastqc.html [2025-01-28 15:06:25,401] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_48h_Casp_h48_I.2_fastqc.html [2025-01-28 15:06:25,401] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: 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[DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_24h_Casp_h24_I.1_fastqc.html [2025-01-28 15:06:25,750] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_24h_Casp_h24_I.1_fastqc.html [2025-01-28 15:06:25,750] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_24h_Casp_h24_I.1_fastqc.html [2025-01-28 15:06:25,750] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_24h_Casp_h24_I.1_fastqc.html [2025-01-28 15:06:25,750] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_24h_Casp_h24_I.1_fastqc.html [2025-01-28 15:06:25,832] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 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HLMLYAFX7_n02_BARSEQ_24h_Casp_h24_0.05.1_fastqc.html [2025-01-28 15:06:25,914] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_24h_Casp_h24_0.05.1_fastqc.html [2025-01-28 15:06:25,914] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_24h_Casp_h24_0.05.1_fastqc.html [2025-01-28 15:06:25,995] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:25,997] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:25,997] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:25,997] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:25,997] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:25,997] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:25,997] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.1_fastqc.html [2025-01-28 15:06:26,081] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,083] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,083] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,083] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,083] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,083] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,083] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_48h_Casp_h48_I.1_fastqc.html [2025-01-28 15:06:26,166] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,168] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,168] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,168] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,168] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,168] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,169] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HLMLYAFX7_n01_BARSEQ_72h_Casp_h72_I.2_fastqc.html [2025-01-28 15:06:26,734] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2025-01-28 15:06:26,736] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2025-01-28 15:06:26,754] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 21 samples (table) [2025-01-28 15:06:26,764] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2025-01-28 15:06:26,765] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2025-01-28 15:06:26,770] multiqc [DEBUG ] No samples found: conpair [2025-01-28 15:06:26,775] multiqc [DEBUG ] No samples found: peddy [2025-01-28 15:06:26,780] multiqc [DEBUG ] No samples found: somalier [2025-01-28 15:06:26,784] multiqc [DEBUG ] No samples found: methylQA [2025-01-28 15:06:26,792] multiqc [DEBUG ] No samples found: mosdepth [2025-01-28 15:06:26,797] multiqc [DEBUG ] No samples found: phantompeakqualtools [2025-01-28 15:06:26,800] multiqc [DEBUG ] No samples found: qualimap [2025-01-28 15:06:26,805] multiqc [DEBUG ] No samples found: preseq [2025-01-28 15:06:26,809] multiqc [DEBUG ] No samples found: quast [2025-01-28 15:06:26,814] multiqc [DEBUG ] No samples found: qorts [2025-01-28 15:06:26,819] multiqc [DEBUG ] No samples found: rna_seqc [2025-01-28 15:06:26,823] multiqc [DEBUG ] No samples found: rockhopper [2025-01-28 15:06:26,828] multiqc [DEBUG ] No samples found: rsem [2025-01-28 15:06:26,838] multiqc [DEBUG ] No samples found: rseqc [2025-01-28 15:06:26,842] multiqc [DEBUG ] No samples found: busco [2025-01-28 15:06:26,847] multiqc [DEBUG ] No samples found: goleft_indexcov [2025-01-28 15:06:26,851] multiqc [DEBUG ] No samples found: disambiguate [2025-01-28 15:06:26,857] multiqc [DEBUG ] No samples found: supernova [2025-01-28 15:06:26,871] multiqc [DEBUG ] No samples found: deeptools [2025-01-28 15:06:26,875] multiqc [DEBUG ] No samples found: sargasso [2025-01-28 15:06:26,880] multiqc [DEBUG ] No samples found: verifybamid [2025-01-28 15:06:26,885] multiqc [DEBUG ] No samples found: mirtrace [2025-01-28 15:06:26,890] multiqc [DEBUG ] No samples found: happy [2025-01-28 15:06:26,895] multiqc [DEBUG ] No samples found: mirtop [2025-01-28 15:06:26,901] multiqc [DEBUG ] No samples found: homer [2025-01-28 15:06:26,905] multiqc [DEBUG ] No samples found: macs2 [2025-01-28 15:06:26,909] multiqc [DEBUG ] No samples found: theta2 [2025-01-28 15:06:26,914] multiqc [DEBUG ] No samples found: snpeff [2025-01-28 15:06:26,920] multiqc [DEBUG ] No samples found: gatk [2025-01-28 15:06:26,924] multiqc [DEBUG ] No samples found: htseq [2025-01-28 15:06:26,930] multiqc [DEBUG ] No samples found: bcftools [2025-01-28 15:06:26,934] multiqc [DEBUG ] No samples found: featureCounts [2025-01-28 15:06:26,940] multiqc [DEBUG ] No samples found: fgbio [2025-01-28 15:06:26,953] multiqc [DEBUG ] No samples found: dragen [2025-01-28 15:06:26,958] multiqc [DEBUG ] No samples found: dedup [2025-01-28 15:06:26,963] multiqc [DEBUG ] No samples found: damageprofiler [2025-01-28 15:06:26,985] multiqc [DEBUG ] No samples found: biobambam2 [2025-01-28 15:06:26,989] multiqc [DEBUG ] No samples found: mtnucratio [2025-01-28 15:06:26,992] multiqc [DEBUG ] No samples found: picard [2025-01-28 15:06:26,996] multiqc [DEBUG ] No samples found: prokka [2025-01-28 15:06:27,001] multiqc [DEBUG ] No samples found: samblaster [2025-01-28 15:06:27,009] multiqc [DEBUG ] No samples found: samtools [2025-01-28 15:06:27,014] multiqc [DEBUG ] No samples found: sexdeterrmine [2025-01-28 15:06:27,018] multiqc [DEBUG ] No samples found: bamtools [2025-01-28 15:06:27,023] multiqc [DEBUG ] No samples found: jellyfish [2025-01-28 15:06:27,030] multiqc [DEBUG ] No samples found: vcftools [2025-01-28 15:06:27,035] multiqc [DEBUG ] No samples found: longranger [2025-01-28 15:06:27,039] multiqc [DEBUG ] No samples found: stacks [2025-01-28 15:06:27,044] multiqc [DEBUG ] No samples found: varscan2 [2025-01-28 15:06:27,058] multiqc [DEBUG ] No samples found: bbmap [2025-01-28 15:06:27,063] multiqc [DEBUG ] No samples found: bismark [2025-01-28 15:06:27,068] multiqc [DEBUG ] No samples found: biscuit [2025-01-28 15:06:27,073] multiqc [DEBUG ] No samples found: hicexplorer [2025-01-28 15:06:27,078] multiqc [DEBUG ] No samples found: hicup [2025-01-28 15:06:27,082] multiqc [DEBUG ] No samples found: hicpro [2025-01-28 15:06:27,086] multiqc [DEBUG ] No samples found: salmon [2025-01-28 15:06:27,091] multiqc [DEBUG ] No samples found: kallisto [2025-01-28 15:06:27,096] multiqc [DEBUG ] No samples found: slamdunk [2025-01-28 15:06:27,101] multiqc [DEBUG ] No samples found: star [2025-01-28 15:06:27,105] multiqc [DEBUG ] No samples found: hisat2 [2025-01-28 15:06:27,110] multiqc [DEBUG ] No samples found: tophat [2025-01-28 15:06:27,114] multiqc [DEBUG ] No samples found: bowtie2 [2025-01-28 15:06:27,119] multiqc [DEBUG ] No samples found: bowtie1 [2025-01-28 15:06:27,123] multiqc [DEBUG ] No samples found: snpsplit [2025-01-28 15:06:27,128] multiqc [DEBUG ] No samples found: kat [2025-01-28 15:06:27,132] multiqc [DEBUG ] No samples found: leehom [2025-01-28 15:06:27,136] multiqc [DEBUG ] No samples found: adapterRemoval [2025-01-28 15:06:27,141] multiqc [DEBUG ] No samples found: clipandmerge [2025-01-28 15:06:27,146] multiqc [DEBUG ] No samples found: cutadapt [2025-01-28 15:06:27,150] multiqc [DEBUG ] No samples found: flexbar [2025-01-28 15:06:27,155] multiqc [DEBUG ] No samples found: kaiju [2025-01-28 15:06:27,159] multiqc [DEBUG ] No samples found: kraken [2025-01-28 15:06:27,164] multiqc [DEBUG ] No samples found: malt [2025-01-28 15:06:27,169] multiqc [DEBUG ] No samples found: trimmomatic [2025-01-28 15:06:27,173] multiqc [DEBUG ] No samples found: sickle [2025-01-28 15:06:27,177] multiqc [DEBUG ] No samples found: skewer [2025-01-28 15:06:27,181] multiqc [DEBUG ] No samples found: sortmerna [2025-01-28 15:06:27,186] multiqc [DEBUG ] No samples found: biobloomtools [2025-01-28 15:06:27,191] multiqc [DEBUG ] No samples found: fastq_screen [2025-01-28 15:06:27,196] multiqc [DEBUG ] No samples found: afterqc [2025-01-28 15:06:27,200] multiqc [DEBUG ] No samples found: fastp [2025-01-28 15:06:28,795] multiqc.modules.fastqc.fastqc [INFO ] Found 42 reports [2025-01-28 15:06:29,640] multiqc [DEBUG ] No samples found: pycoqc [2025-01-28 15:06:29,645] multiqc [DEBUG ] No samples found: minionqc [2025-01-28 15:06:29,650] multiqc [DEBUG ] No samples found: multivcfanalyzer [2025-01-28 15:06:29,655] multiqc [DEBUG ] No samples found: clusterflow [2025-01-28 15:06:29,659] multiqc [DEBUG ] No samples found: bcl2fastq [2025-01-28 15:06:29,664] multiqc [DEBUG ] No samples found: interop [2025-01-28 15:06:29,669] multiqc [DEBUG ] No samples found: ivar [2025-01-28 15:06:29,673] multiqc [DEBUG ] No samples found: flash [2025-01-28 15:06:29,678] multiqc [DEBUG ] No samples found: seqyclean [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2025-01-28 15:06:29,678] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2025-01-28 15:06:29,679] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2025-01-28 15:06:29,679] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2025-01-28 15:06:29,679] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2025-01-28 15:06:29,679] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2025-01-28 15:06:29,729] multiqc [INFO ] Compressing plot data [2025-01-28 15:06:30,607] multiqc [INFO ] Report : multiqc_report.html [2025-01-28 15:06:30,607] multiqc [INFO ] Data : multiqc_data [2025-01-28 15:06:30,607] multiqc [DEBUG ] Moving data file from '/state/partition1/job-56553407/tmpwj4h189j/multiqc_data' to '/scratch/gencore/GENEFLOW/work/nf/27/2c331681b937fcb29e303cdca2aa3f/merged/multiqc_data' [2025-01-28 15:06:30,756] multiqc [INFO ] MultiQC complete