FastQCFastQC Report
Tue 28 Jan 2025
HLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLMLYAFX7_n02_BARSEQ_72h_Casp_h72_0.05.2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5442722
Sequences flagged as poor quality0
Sequence length73
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTCAGTTATTACCCGGGAATCTCGGGTTTAAACGAATTCGGTGCGAGCGGATCACAAACACCCAGTA59000.10840164167855718No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)