[2022-06-03 07:44:39,265] multiqc                                            [DEBUG  ]  No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2022-06-03 07:44:39,265] multiqc                                            [DEBUG  ]  No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2022-06-03 07:44:39,265] multiqc                                            [DEBUG  ]  No MultiQC config found: multiqc_config.yaml
[2022-06-03 07:44:39,266] multiqc                                            [DEBUG  ]  Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml
[2022-06-03 07:44:39,266] multiqc                                            [DEBUG  ]  New config 'report_section_order': {'demux_report': {'after': 'run_stats'}}
[2022-06-03 07:44:39,267] multiqc                                            [DEBUG  ]  Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HLMCVAFX3/merged
[2022-06-03 07:44:39,738] multiqc                                            [WARNING]  MultiQC Version v1.12 now available!
[2022-06-03 07:44:39,738] multiqc                                            [INFO   ]  This is MultiQC v1.9
[2022-06-03 07:44:39,738] multiqc                                            [DEBUG  ]  Command     : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HLMCVAFX3/merged
[2022-06-03 07:44:39,738] multiqc                                            [DEBUG  ]  Working dir : /scratch/gencore/logs/html/HLMCVAFX3/merged
[2022-06-03 07:44:39,738] multiqc                                            [INFO   ]  Template    : default
[2022-06-03 07:44:39,738] multiqc                                            [DEBUG  ]  Running Python 3.8.6 (default, Oct 11 2020, 20:34:31)  [GCC Intel(R) C++ gcc 8.3.1 mode]
[2022-06-03 07:44:39,738] multiqc                                            [INFO   ]  Searching   : /scratch/gencore/logs/html/HLMCVAFX3/merged
[2022-06-03 07:44:39,738] multiqc                                            [DEBUG  ]  Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2022-06-03 07:44:39,738] multiqc                                            [DEBUG  ]  Using temporary directory for creating report: /state/partition1/job-20486911/tmpy4yid8i2
[2022-06-03 07:44:39,849] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_1_fastqc.html
[2022-06-03 07:44:39,851] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_1_fastqc.html
[2022-06-03 07:44:39,896] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_12_fastqc.html
[2022-06-03 07:44:39,898] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_12_fastqc.html
[2022-06-03 07:44:39,935] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_3_fastqc.html
[2022-06-03 07:44:39,937] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_3_fastqc.html
[2022-06-03 07:44:39,975] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2022-06-03 07:44:39,976] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2022-06-03 07:44:40,311] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_3_fastqc.html
[2022-06-03 07:44:40,312] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_3_fastqc.html
[2022-06-03 07:44:40,352] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_11_fastqc.html
[2022-06-03 07:44:40,354] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_11_fastqc.html
[2022-06-03 07:44:40,393] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_6_fastqc.html
[2022-06-03 07:44:40,394] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_6_fastqc.html
[2022-06-03 07:44:40,435] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_1_fastqc.html
[2022-06-03 07:44:40,437] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_1_fastqc.html
[2022-06-03 07:44:40,479] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_4_fastqc.html
[2022-06-03 07:44:40,481] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_4_fastqc.html
[2022-06-03 07:44:40,522] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_5_fastqc.html
[2022-06-03 07:44:40,524] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_5_fastqc.html
[2022-06-03 07:44:40,566] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_2_fastqc.html
[2022-06-03 07:44:40,568] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_2_fastqc.html
[2022-06-03 07:44:40,607] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_13_fastqc.html
[2022-06-03 07:44:40,609] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_13_fastqc.html
[2022-06-03 07:44:40,647] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_7_fastqc.html
[2022-06-03 07:44:40,649] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_7_fastqc.html
[2022-06-03 07:44:40,689] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_undetermined_fastqc.html
[2022-06-03 07:44:40,691] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_undetermined_fastqc.html
[2022-06-03 07:44:40,729] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_5_fastqc.html
[2022-06-03 07:44:40,731] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_5_fastqc.html
[2022-06-03 07:44:40,773] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_9_fastqc.html
[2022-06-03 07:44:40,775] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_9_fastqc.html
[2022-06-03 07:44:40,814] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_10_fastqc.html
[2022-06-03 07:44:40,816] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_10_fastqc.html
[2022-06-03 07:44:40,858] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_8_fastqc.html
[2022-06-03 07:44:40,859] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_8_fastqc.html
[2022-06-03 07:44:40,900] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_6_fastqc.html
[2022-06-03 07:44:40,902] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_6_fastqc.html
[2022-06-03 07:44:40,944] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_12_fastqc.html
[2022-06-03 07:44:40,946] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_12_fastqc.html
[2022-06-03 07:44:40,985] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_11_fastqc.html
[2022-06-03 07:44:40,987] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_11_fastqc.html
[2022-06-03 07:44:41,027] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_13_fastqc.html
[2022-06-03 07:44:41,028] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_13_fastqc.html
[2022-06-03 07:44:41,069] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_4_fastqc.html
[2022-06-03 07:44:41,070] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_4_fastqc.html
[2022-06-03 07:44:41,111] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_2_fastqc.html
[2022-06-03 07:44:41,113] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_2_fastqc.html
[2022-06-03 07:44:41,153] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_undetermined_fastqc.html
[2022-06-03 07:44:41,155] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_undetermined_fastqc.html
[2022-06-03 07:44:41,195] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_8_fastqc.html
[2022-06-03 07:44:41,197] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_8_fastqc.html
[2022-06-03 07:44:41,236] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_7_fastqc.html
[2022-06-03 07:44:41,238] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_7_fastqc.html
[2022-06-03 07:44:41,279] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_9_fastqc.html
[2022-06-03 07:44:41,281] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n02_dad3a_9_fastqc.html
[2022-06-03 07:44:41,322] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_10_fastqc.html
[2022-06-03 07:44:41,324] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: HLMCVAFX3_n01_dad3a_10_fastqc.html
[2022-06-03 07:44:41,886] multiqc.plots.bargraph                             [DEBUG  ]  Using matplotlib version 3.3.2
[2022-06-03 07:44:41,887] multiqc.plots.linegraph                            [DEBUG  ]  Using matplotlib version 3.3.2
[2022-06-03 07:44:41,903] multiqc.modules.custom_content.custom_content      [INFO   ]  undetermined_barcodes: Found 20 samples (table)
[2022-06-03 07:44:41,910] multiqc.modules.custom_content.custom_content      [INFO   ]  demux_report: Found 14 samples (table)
[2022-06-03 07:44:41,911] multiqc.modules.custom_content.custom_content      [INFO   ]  run_stats: Found 1 samples (table)
[2022-06-03 07:44:41,919] multiqc                                            [DEBUG  ]  No samples found: conpair
[2022-06-03 07:44:41,925] multiqc                                            [DEBUG  ]  No samples found: peddy
[2022-06-03 07:44:41,931] multiqc                                            [DEBUG  ]  No samples found: somalier
[2022-06-03 07:44:41,937] multiqc                                            [DEBUG  ]  No samples found: methylQA
[2022-06-03 07:44:41,948] multiqc                                            [DEBUG  ]  No samples found: mosdepth
[2022-06-03 07:44:41,953] multiqc                                            [DEBUG  ]  No samples found: phantompeakqualtools
[2022-06-03 07:44:41,957] multiqc                                            [DEBUG  ]  No samples found: qualimap
[2022-06-03 07:44:41,963] multiqc                                            [DEBUG  ]  No samples found: preseq
[2022-06-03 07:44:41,968] multiqc                                            [DEBUG  ]  No samples found: quast
[2022-06-03 07:44:41,975] multiqc                                            [DEBUG  ]  No samples found: qorts
[2022-06-03 07:44:41,981] multiqc                                            [DEBUG  ]  No samples found: rna_seqc
[2022-06-03 07:44:41,987] multiqc                                            [DEBUG  ]  No samples found: rockhopper
[2022-06-03 07:44:41,994] multiqc                                            [DEBUG  ]  No samples found: rsem
[2022-06-03 07:44:42,009] multiqc                                            [DEBUG  ]  No samples found: rseqc
[2022-06-03 07:44:42,016] multiqc                                            [DEBUG  ]  No samples found: busco
[2022-06-03 07:44:42,023] multiqc                                            [DEBUG  ]  No samples found: goleft_indexcov
[2022-06-03 07:44:42,029] multiqc                                            [DEBUG  ]  No samples found: disambiguate
[2022-06-03 07:44:42,034] multiqc                                            [DEBUG  ]  No samples found: supernova
[2022-06-03 07:44:42,064] multiqc                                            [DEBUG  ]  No samples found: deeptools
[2022-06-03 07:44:42,069] multiqc                                            [DEBUG  ]  No samples found: sargasso
[2022-06-03 07:44:42,075] multiqc                                            [DEBUG  ]  No samples found: verifybamid
[2022-06-03 07:44:42,080] multiqc                                            [DEBUG  ]  No samples found: mirtrace
[2022-06-03 07:44:42,087] multiqc                                            [DEBUG  ]  No samples found: happy
[2022-06-03 07:44:42,094] multiqc                                            [DEBUG  ]  No samples found: mirtop
[2022-06-03 07:44:42,102] multiqc                                            [DEBUG  ]  No samples found: homer
[2022-06-03 07:44:42,107] multiqc                                            [DEBUG  ]  No samples found: macs2
[2022-06-03 07:44:42,114] multiqc                                            [DEBUG  ]  No samples found: theta2
[2022-06-03 07:44:42,119] multiqc                                            [DEBUG  ]  No samples found: snpeff
[2022-06-03 07:44:42,127] multiqc                                            [DEBUG  ]  No samples found: gatk
[2022-06-03 07:44:42,132] multiqc                                            [DEBUG  ]  No samples found: htseq
[2022-06-03 07:44:42,139] multiqc                                            [DEBUG  ]  No samples found: bcftools
[2022-06-03 07:44:42,146] multiqc                                            [DEBUG  ]  No samples found: featureCounts
[2022-06-03 07:44:42,154] multiqc                                            [DEBUG  ]  No samples found: fgbio
[2022-06-03 07:44:42,173] multiqc                                            [DEBUG  ]  No samples found: dragen
[2022-06-03 07:44:42,178] multiqc                                            [DEBUG  ]  No samples found: dedup
[2022-06-03 07:44:42,186] multiqc                                            [DEBUG  ]  No samples found: damageprofiler
[2022-06-03 07:44:42,211] multiqc                                            [DEBUG  ]  No samples found: biobambam2
[2022-06-03 07:44:42,218] multiqc                                            [DEBUG  ]  No samples found: mtnucratio
[2022-06-03 07:44:42,220] multiqc                                            [DEBUG  ]  No samples found: picard
[2022-06-03 07:44:42,226] multiqc                                            [DEBUG  ]  No samples found: prokka
[2022-06-03 07:44:42,233] multiqc                                            [DEBUG  ]  No samples found: samblaster
[2022-06-03 07:44:42,244] multiqc                                            [DEBUG  ]  No samples found: samtools
[2022-06-03 07:44:42,249] multiqc                                            [DEBUG  ]  No samples found: sexdeterrmine
[2022-06-03 07:44:42,255] multiqc                                            [DEBUG  ]  No samples found: bamtools
[2022-06-03 07:44:42,263] multiqc                                            [DEBUG  ]  No samples found: jellyfish
[2022-06-03 07:44:42,273] multiqc                                            [DEBUG  ]  No samples found: vcftools
[2022-06-03 07:44:42,278] multiqc                                            [DEBUG  ]  No samples found: longranger
[2022-06-03 07:44:42,284] multiqc                                            [DEBUG  ]  No samples found: stacks
[2022-06-03 07:44:42,290] multiqc                                            [DEBUG  ]  No samples found: varscan2
[2022-06-03 07:44:42,309] multiqc                                            [DEBUG  ]  No samples found: bbmap
[2022-06-03 07:44:42,314] multiqc                                            [DEBUG  ]  No samples found: bismark
[2022-06-03 07:44:42,320] multiqc                                            [DEBUG  ]  No samples found: biscuit
[2022-06-03 07:44:42,326] multiqc                                            [DEBUG  ]  No samples found: hicexplorer
[2022-06-03 07:44:42,333] multiqc                                            [DEBUG  ]  No samples found: hicup
[2022-06-03 07:44:42,338] multiqc                                            [DEBUG  ]  No samples found: hicpro
[2022-06-03 07:44:42,344] multiqc                                            [DEBUG  ]  No samples found: salmon
[2022-06-03 07:44:42,349] multiqc                                            [DEBUG  ]  No samples found: kallisto
[2022-06-03 07:44:42,357] multiqc                                            [DEBUG  ]  No samples found: slamdunk
[2022-06-03 07:44:42,364] multiqc                                            [DEBUG  ]  No samples found: star
[2022-06-03 07:44:42,370] multiqc                                            [DEBUG  ]  No samples found: hisat2
[2022-06-03 07:44:42,375] multiqc                                            [DEBUG  ]  No samples found: tophat
[2022-06-03 07:44:42,380] multiqc                                            [DEBUG  ]  No samples found: bowtie2
[2022-06-03 07:44:42,387] multiqc                                            [DEBUG  ]  No samples found: bowtie1
[2022-06-03 07:44:42,393] multiqc                                            [DEBUG  ]  No samples found: snpsplit
[2022-06-03 07:44:42,398] multiqc                                            [DEBUG  ]  No samples found: kat
[2022-06-03 07:44:42,403] multiqc                                            [DEBUG  ]  No samples found: leehom
[2022-06-03 07:44:42,408] multiqc                                            [DEBUG  ]  No samples found: adapterRemoval
[2022-06-03 07:44:42,414] multiqc                                            [DEBUG  ]  No samples found: clipandmerge
[2022-06-03 07:44:42,419] multiqc                                            [DEBUG  ]  No samples found: cutadapt
[2022-06-03 07:44:42,424] multiqc                                            [DEBUG  ]  No samples found: flexbar
[2022-06-03 07:44:42,430] multiqc                                            [DEBUG  ]  No samples found: kaiju
[2022-06-03 07:44:42,436] multiqc                                            [DEBUG  ]  No samples found: kraken
[2022-06-03 07:44:42,442] multiqc                                            [DEBUG  ]  No samples found: malt
[2022-06-03 07:44:42,448] multiqc                                            [DEBUG  ]  No samples found: trimmomatic
[2022-06-03 07:44:42,455] multiqc                                            [DEBUG  ]  No samples found: sickle
[2022-06-03 07:44:42,461] multiqc                                            [DEBUG  ]  No samples found: skewer
[2022-06-03 07:44:42,466] multiqc                                            [DEBUG  ]  No samples found: sortmerna
[2022-06-03 07:44:42,473] multiqc                                            [DEBUG  ]  No samples found: biobloomtools
[2022-06-03 07:44:42,481] multiqc                                            [DEBUG  ]  No samples found: fastq_screen
[2022-06-03 07:44:42,487] multiqc                                            [DEBUG  ]  No samples found: afterqc
[2022-06-03 07:44:42,493] multiqc                                            [DEBUG  ]  No samples found: fastp
[2022-06-03 07:44:43,165] multiqc.modules.fastqc.fastqc                      [INFO   ]  Found 28 reports
[2022-06-03 07:44:43,743] multiqc                                            [DEBUG  ]  No samples found: pycoqc
[2022-06-03 07:44:43,748] multiqc                                            [DEBUG  ]  No samples found: minionqc
[2022-06-03 07:44:43,753] multiqc                                            [DEBUG  ]  No samples found: multivcfanalyzer
[2022-06-03 07:44:43,758] multiqc                                            [DEBUG  ]  No samples found: clusterflow
[2022-06-03 07:44:43,768] multiqc                                            [DEBUG  ]  No samples found: bcl2fastq
[2022-06-03 07:44:43,775] multiqc                                            [DEBUG  ]  No samples found: interop
[2022-06-03 07:44:43,782] multiqc                                            [DEBUG  ]  No samples found: ivar
[2022-06-03 07:44:43,788] multiqc                                            [DEBUG  ]  No samples found: flash
[2022-06-03 07:44:43,793] multiqc                                            [DEBUG  ]  No samples found: seqyclean
[2022-06-03 07:44:43,793] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module '	Barcodes of Undetermined Reads'.
[2022-06-03 07:44:43,793] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2022-06-03 07:44:43,793] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2022-06-03 07:44:43,793] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2022-06-03 07:44:43,826] multiqc                                            [INFO   ]  Compressing plot data
[2022-06-03 07:44:44,332] multiqc                                            [INFO   ]  Report      : multiqc_report.html
[2022-06-03 07:44:44,332] multiqc                                            [INFO   ]  Data        : multiqc_data
[2022-06-03 07:44:44,332] multiqc                                            [DEBUG  ]  Moving data file from '/state/partition1/job-20486911/tmpy4yid8i2/multiqc_data' to '/scratch/gencore/logs/html/HLMCVAFX3/merged/multiqc_data'
[2022-06-03 07:44:44,465] multiqc                                            [INFO   ]  MultiQC complete