FastQCFastQC Report
Tue 24 Dec 2024
HLLT2AFX7_n01_Donor1_ETP.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLLT2AFX7_n01_Donor1_ETP.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22369423
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGGACCAAAACCTGCG6570642.9373310165398547No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGGACCAAAACCT5624942.5145664239976147No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGAGCGAGCAGCCGGC4379411.9577661882472337No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCTCCGGACCAAAACCTGC4366941.9521916144193796No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCTCCGGACCAAAACCTGC3961851.7711006671919969No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCAGGACCAAAACCTGCG3943501.7628975052239835No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCAGGACCAAAACCTGCG3909251.7475864263463567No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGAGCGAGCAGCC3484701.5577961040836859No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCTCCGGACCAAAACCTGC3278491.4656122332703887No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCTCCGAGCGAGCAGCCGG2974231.3295962081811408No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCTCCGGACCAAAACCTGC2905121.2987013567582857No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATTCACCGGACCAAAACCT2890381.2921120048559143No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCAGAGCGAGCAGCCGGC2670671.1938931102514356No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATTCACCGGACCAAAACCT2642511.1813044976618305No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCAGAGCGAGCAGCCGGC2604321.1642320859147774No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCTCCGAGCGAGCAGCCGG2591901.1586798640268907No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCCGGACCAAAACCTGCG2317421.0359766543821896No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCTCCGAGCGAGCAGCCGG2164110.9674411360543363No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCCGGACCAAAACCTGCG1847180.8257611293773648No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCTCCGAGCGAGCAGCCGG1841390.823172774729147No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATTCACCGAGCGAGCAGCC1789210.7998462901792326No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGCGGCGGCTGACAAG1772570.7924075645581024No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATACACCGGACCAAAACCT1763430.788321629932073No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATTCACCGAGCGAGCAGCC1650990.7380565873335222No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCCGAGCGAGCAGCCGGC1501140.6710678232514088No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGTGTGCAGCGAGCAG1337040.5977087562786041No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGCGGCGGCTGAC1210710.5412343447571267No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCCGAGCGAGCAGCCGGC1205000.5386817532128566No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACACAGGACCAAAACCTGCG1200130.5365046742600379No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATACACCGAGCGAGCAGCC1134480.5071565770829225No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCAGCGGCGGCTGACAAG1049180.46902416749864306No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCTCCGCGGCGGCTGACAA1022900.45727598785181No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCAGCGGCGGCTGACAAG1013470.45306041197396996No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGTGTGCAGCGAG1006270.4498417326186732No Hit
TCGATCGTTACCATCTTCAGGAAAGGACGAATCTCCGGACCAAAACCTGC995760.4451433548375387No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCCGGACCAAAACCTGCG930900.4161484183119073No Hit
CGATCATGATCGTCTTGAGGATAGGACGAAACTCAGGACCAAAACCTGCG928260.4149682358816318No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGGACCAAAACCT928050.41487435773376896No Hit
CGATCATGATCGTCTTGACGATAGGACGAAACTCAGGACCAAAACCTGCG888270.3970911542957545No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCTCCGCGGCGGCTGACAA874280.3908370814928932No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGAGCGAGCAGCC865570.3869433735505829No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGGACCAAAACCTGC851920.38084129393949945No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCTCCGTGTGCAGCGAGCA851040.3804478997960743No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACACCGGACCAAAACCTGCG845220.3778461339838761No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACACAGAGCGAGCAGCCGGC834630.37311199309879384No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAAACTCCGGACCAAAACCTGC817590.3654944519579249No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCAGTGTGCAGCGAGCAG810170.3621774240667719No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCAGTGTGCAGCGAGCAG787650.3521101103054826No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATACACCGGACCAAAACCT765690.34229313827182756No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACAGGACCAAAACCTGCG764010.341542113088925No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCTCCGCGGCGGCTGACAA752310.3363117591365678No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATACACCGGACCAAAACCT746410.33367423022042186No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAAACTCCGGACCAAAACCTGC744840.33297237930544743No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCTCCGTGTGCAGCGAGCA738660.3302096795254844No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACACAGGACCAAAACCTGCG730930.32675406960653386No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGAAAGCGGTCAAGGC723860.32359350529515224No Hit
TCGATCGTTACCATCTTCAGGAAAGGACGAATCTCCGAGCGAGCAGCCGG665390.2974551466973467No Hit
GATCGATAACGCATTTCTAGTGGAAAGGACGATTCACCGGACCAAAACCT653450.29211750343314624No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATTCACCGCGGCGGCTGAC647600.2895023264569676No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCACCGGACCAAAACCTGC630510.2818624333761313No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCTCCGTGTGCAGCGAGCA620190.27724899296687266No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGAAAGCGGTCAA620110.27721322986292496No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCCGAGCGAGCAGCCGGC614730.2748081611224393No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCTCCGCGGCGGCTGACAA612740.27391855391173925No Hit
CGATCATGATCGTCTTGAGGATAGGACGAAACTCAGAGCGAGCAGCCGGC608560.27204993173046976No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAAACTCCGGACCAAAACCTGC608130.2718577050467506No Hit
CGATCATGATCGTCTTGACGATAGGACGAAACTCAGAGCGAGCAGCCGGC603530.26980132656975553No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATTCACCGCGGCGGCTGAC599980.26821433883207446No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAAACTCCGAGCGAGCAGCCGG577920.25835266291848474No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACTCCGAGCGAGCAGCCGG575390.25722165475613745No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGGACCAAAACCTGCG574390.2567746159567907No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACACCGAGCGAGCAGCCGGC571160.25533068063490055No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACAGAGCGAGCAGCCGGC535730.23949209597404456No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCTCCGTGTGCAGCGAGCA526040.23516029000837435No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCACCGGACCAAAACCTGC520630.23274181010390838No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACACAGAGCGAGCAGCCGGC519440.23220983393268568No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATTCACCGTGTGCAGCGAG518880.23195949220505152No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGGACCAAAACCT515330.23037250446737048No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAAACACCGGACCAAAACCTGC514630.23005957730782775No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCTCCGAAAGCGGTCAAGG510640.22827589249843414No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGGACCAAAACCTGC499290.22320200212584831No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATACACCGAGCGAGCAGCC492390.2201174344103556No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGATTCACCGGACCAAAACCTG485150.216880873503085No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATACACCGAGCGAGCAGCC484740.21669758759535282No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAAACTCCGAGCGAGCAGCCGG478840.21406005867920688No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATTCACCGTGTGCAGCGAG477450.2134386747481149No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCTCCGAAAGCGGTCAAGG455970.20383628133814627No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGAATCACCGGACCAAAACCT453850.2028885590835311No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAAACACCGGACCAAAACCTGC449480.20093499953038574No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGAGCGAGCAGCC437900.19575829023395017No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCACCGGACCAAAACCTGC436240.19501620582703452No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCAGAAAGCGGTCAAGGC433660.19386284572471987No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACTCAGAAAGCGGTCAAGGC432540.1933621622694515No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAAACTCCGAGCGAGCAGCCGG422640.18893647815591846No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGAATCACCGAGCGAGCAGCC416520.18620060070391622No Hit
GATCGATAACGCATTTCTAGTGGAAAGGACGATTCACCGAGCGAGCAGCC405340.18120270692721935No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCCGTGTGCAGCGAGCAG405160.18112223994333693No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCACCGGACCAAAACCTGC396520.17725982471698085No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGAATCACCGGACCAAAACCT394530.1763702175062808No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGAGCGAGCAGCCGGC390890.17474299627665854No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCTCCGAAAGCGGTCAAGG381120.17037542720704063No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATACACCGTGTGCAGCGAG378980.16941876417643853No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAATCACCGAGCGAGCAGCCGG372780.16664712362048856No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGAATCACCGAGCGAGCAGCC371790.16620455520913524No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACACCGGACCAAAACCTGCG364180.16280258994610636No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGTGCGACTCGAGACA360700.1612468949243796No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCCGTGTGCAGCGAGCAG348100.15561420605261028No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACACAGCGGCGGCTGACAAG337980.151090173403221No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAAACACCGGACCAAAACCTGC335090.14979823127310885No Hit
ATCGATTCCTTGGTTCTACAGGAAAGGACGATTCACCGGACCAAAACCTG329880.14746915912851216No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAAACACCGAGCGAGCAGCCGG328670.14692824218130257No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCTCCGAAAGCGGTCAAGG327600.14644991066600155No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACACAGTGTGCAGCGAGCAG323560.14464387391664058No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGATTCTCCGGACCAAAACCTG322580.14420577589328076No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATACACCGCGGCGGCTGAC315150.14088427761413425No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCACCGAGCGAGCAGCCGG311430.13922129328056426No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGTGCGACTCGAG311220.13912741513270147No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGATTCACCGAAAGCGGTCAA308170.1377639467946938No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAGCGAGCAGCCGG301770.1349028984788745No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGATTCACCGAGCGAGCAGCCG300570.13436645191965835No Hit
ATCGATTCCTTGGTTCTAGTGGAAAGGACGATTCACCGGACCAAAACCTG298860.1336020155727754No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGTGTGCAGCGAG288780.12909586447535995No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGAGAGCGTGGCCCAG285940.12782627428521515No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGAAACACCGGACCAAAACCT285840.12778157040528046No Hit
GATCGATAACGCATTTCTACTGGAAAGGACGATTCACCGAAAGCGGTCAA284610.12723171268208391No Hit
ATCGATACCTTGGTTCTACAGGAAAGGACGATTCACCGGACCAAAACCTG284360.12711995298224724No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACTCCGCGGCGGCTGACAAG278650.1245673614379772No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCCGAAAGCGGTCAAGGC277730.12415608574257816No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGCTGTGACGCCCCGT277210.12392362556691784No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAAACACCGAGCGAGCAGCCGG262940.11754438190023946No Hit
CGATCATGATCGTCTTGAGGAAAGGACGAAACTCAGGTTTCCAGCTAGGA252830.1130248196388436No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAATCACCGCGGCGGCTGAC252410.11283706334311798No Hit
CGATCATGATCGTCTTGACGAAAGGACGAAACACCGAGCGAGCAGCCGGC251490.11242578764771895No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGGTTTCCAGCTA247140.11048116887056049No Hit
ATCGATACCTTGGTTCTAGAGGAAAGGACGATTCACCGGACCAAAACCTG246440.11016824171101777No Hit
TCGATCGTTACCATCTTCAGGAAAGGACGAAACTCCGGACCAAAACCTGC244960.10950662428798454No Hit
TCGATCGTTACCATCTTCTGGAAAGGACGAATCACCGAGCGAGCAGCCGG244220.10917581557646794No Hit
TCGATCGTTACCATCTTCACGAAAGGACGAATCTCCGTGCGACTCGAGAC241280.10786152150638842No Hit
TCGATCGTTACCATCTTCTCGAAAGGACGAATCACCGAGCGAGCAGCCGG235960.10548327509386363No Hit
CGATCATGATCGTCTTGAGGATAGGACGAAACTCAGCGGCGGCTGACAAG235960.10548327509386363No Hit
GATCGATAACGCATTTCTTCTGGAAAGGACGAAACACCGAGCGAGCAGCC234500.10483059844681734No Hit
ATCGATTCCTTGGTTCTAGAGGAAAGGACGATTCACCGGACCAAAACCTG233620.10443720430339216No Hit
GATCGATAACGCATTTCTAGTGGAAAGGACGATACACCGGACCAAAACCT231860.10365041601654186No Hit
CGATCATGATCGTCTTGACGATAGGACGAAACTCAGCGGCGGCTGACAAG230380.10298879859350865No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGATTCACCGAGAGCGTGGCC228550.10217071759070406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)