Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HLJY3DRX2_n01_1A HLJY3DRX2_n01_1A.fastq.gz Conventional base calls Sanger / Illumina 1.9 32452318.0 0.0 101.0 57.0 26.38749211996832 101.0 pass pass pass pass fail pass pass pass fail fail fail HLJY3DRX2_n01_2A HLJY3DRX2_n01_2A.fastq.gz Conventional base calls Sanger / Illumina 1.9 6146371.0 0.0 101.0 55.0 16.90761617881944 101.0 pass pass pass pass fail fail pass pass fail fail fail HLJY3DRX2_n01_2C HLJY3DRX2_n01_2C.fastq.gz Conventional base calls Sanger / Illumina 1.9 1775720.0 0.0 101.0 55.0 37.560213435728485 101.0 pass pass pass pass fail fail pass pass fail fail fail HLJY3DRX2_n01_3A HLJY3DRX2_n01_3A.fastq.gz Conventional base calls Sanger / Illumina 1.9 23231942.0 0.0 101.0 56.0 28.763534730378176 101.0 pass pass pass pass fail pass pass pass fail fail fail HLJY3DRX2_n01_4A HLJY3DRX2_n01_4A.fastq.gz Conventional base calls Sanger / Illumina 1.9 6551314.0 0.0 101.0 55.0 20.005318180754887 101.0 pass pass pass pass fail fail pass pass fail fail fail HLJY3DRX2_n01_4C HLJY3DRX2_n01_4C.fastq.gz Conventional base calls Sanger / Illumina 1.9 4961849.0 0.0 101.0 53.0 20.912116104143365 101.0 pass pass pass pass fail fail pass pass fail fail fail HLJY3DRX2_n01_5A HLJY3DRX2_n01_5A.fastq.gz Conventional base calls Sanger / Illumina 1.9 253.0 0.0 101.0 40.0 100.0 101.0 pass pass fail pass warn warn pass pass pass warn pass HLJY3DRX2_n01_6A HLJY3DRX2_n01_6A.fastq.gz Conventional base calls Sanger / Illumina 1.9 7.0 0.0 101.0 48.0 100.0 101.0 pass pass pass fail fail pass pass pass fail fail HLJY3DRX2_n01_6C HLJY3DRX2_n01_6C.fastq.gz Conventional base calls Sanger / Illumina 1.9 2466361.0 0.0 101.0 59.0 25.074082154463124 101.0 pass pass pass pass fail fail pass pass fail fail fail HLJY3DRX2_n01_7C HLJY3DRX2_n01_7C.fastq.gz Conventional base calls Sanger / Illumina 1.9 2464023.0 0.0 101.0 55.0 44.04285129879134 101.0 pass pass pass pass fail fail pass pass fail fail fail HLJY3DRX2_n01_BXPC3_R1minus_102722 HLJY3DRX2_n01_BXPC3_R1minus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 113650452.0 0.0 101.0 41.0 27.986222352302047 101.0 pass pass pass pass warn warn pass pass fail pass pass HLJY3DRX2_n01_BXPC3_R2minus_102722 HLJY3DRX2_n01_BXPC3_R2minus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 348050298.0 0.0 101.0 41.0 29.808944629138658 101.0 pass pass pass pass warn warn pass pass fail pass pass HLJY3DRX2_n01_BXPC3_R2plus_102722 HLJY3DRX2_n01_BXPC3_R2plus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 363927628.0 0.0 101.0 41.0 60.8009563232059 101.0 pass pass pass pass warn warn pass pass warn pass pass HLJY3DRX2_n01_BXPC3_R3minus_102722 HLJY3DRX2_n01_BXPC3_R3minus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 358753507.0 0.0 101.0 41.0 36.2634978975283 101.0 pass pass pass pass pass pass pass pass fail pass pass HLJY3DRX2_n01_BXPC3_R3plus_102722 HLJY3DRX2_n01_BXPC3_R3plus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 364487381.0 0.0 101.0 41.0 32.70250909718919 101.0 pass pass pass pass fail pass pass pass fail pass pass HLJY3DRX2_n01_Gecko_v2_L1 HLJY3DRX2_n01_Gecko_v2_L1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3.0 0.0 101.0 48.0 100.0 101.0 pass pass pass fail fail pass pass pass fail fail HLJY3DRX2_n01_Gecko_v2_L2 HLJY3DRX2_n01_Gecko_v2_L2.fastq.gz Conventional base calls Sanger / Illumina 1.9 84.0 0.0 101.0 56.0 100.0 101.0 pass pass fail pass fail fail pass pass pass fail fail HLJY3DRX2_n01_HU2 HLJY3DRX2_n01_HU2.fastq.gz Conventional base calls Sanger / Illumina 1.9 38.0 0.0 101.0 47.0 100.0 101.0 pass pass fail pass fail fail pass pass pass fail pass HLJY3DRX2_n01_MS2 HLJY3DRX2_n01_MS2.fastq.gz Conventional base calls Sanger / Illumina 1.9 463.0 0.0 101.0 39.0 99.35205183585313 101.0 pass pass fail pass warn fail pass pass pass warn pass HLJY3DRX2_n01_undetermined HLJY3DRX2_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 120225564.0 0.0 101.0 45.0 36.85179863487685 101.0 pass pass pass pass fail fail pass pass fail warn warn HLJY3DRX2_n02_1A HLJY3DRX2_n02_1A.fastq.gz Conventional base calls Sanger / Illumina 1.9 32452318.0 0.0 101.0 55.0 40.69390967025782 101.0 pass pass fail pass fail pass warn pass fail warn fail HLJY3DRX2_n02_2A HLJY3DRX2_n02_2A.fastq.gz Conventional base calls Sanger / Illumina 1.9 6146371.0 0.0 101.0 53.0 36.02029475464889 101.0 pass pass fail pass fail fail warn pass fail fail fail HLJY3DRX2_n02_2C HLJY3DRX2_n02_2C.fastq.gz Conventional base calls Sanger / Illumina 1.9 1775720.0 0.0 101.0 51.0 41.701924738022235 101.0 pass pass fail pass fail fail warn pass fail fail fail HLJY3DRX2_n02_3A HLJY3DRX2_n02_3A.fastq.gz Conventional base calls Sanger / Illumina 1.9 23231942.0 0.0 101.0 55.0 44.11647642719076 101.0 pass pass fail pass fail pass warn pass fail warn fail HLJY3DRX2_n02_4A HLJY3DRX2_n02_4A.fastq.gz Conventional base calls Sanger / Illumina 1.9 6551314.0 0.0 101.0 53.0 38.71149495146621 101.0 pass pass fail pass fail fail warn pass fail fail fail HLJY3DRX2_n02_4C HLJY3DRX2_n02_4C.fastq.gz Conventional base calls Sanger / Illumina 1.9 4961849.0 0.0 101.0 50.0 23.840657514871566 101.0 pass pass fail pass fail fail warn pass fail fail fail HLJY3DRX2_n02_5A HLJY3DRX2_n02_5A.fastq.gz Conventional base calls Sanger / Illumina 1.9 253.0 0.0 101.0 40.0 91.30434782608695 101.0 pass pass fail pass fail fail fail pass pass fail pass HLJY3DRX2_n02_6A HLJY3DRX2_n02_6A.fastq.gz Conventional base calls Sanger / Illumina 1.9 7.0 0.0 101.0 42.0 100.0 101.0 pass pass warn fail fail warn pass pass fail fail HLJY3DRX2_n02_6C HLJY3DRX2_n02_6C.fastq.gz Conventional base calls Sanger / Illumina 1.9 2466361.0 0.0 101.0 51.0 33.36093620748869 101.0 pass pass fail pass fail fail warn pass fail fail fail HLJY3DRX2_n02_7C HLJY3DRX2_n02_7C.fastq.gz Conventional base calls Sanger / Illumina 1.9 2464023.0 0.0 101.0 51.0 51.241002596475546 101.0 pass pass fail pass fail fail warn pass warn fail fail HLJY3DRX2_n02_BXPC3_R1minus_102722 HLJY3DRX2_n02_BXPC3_R1minus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 113650452.0 0.0 101.0 41.0 34.90114857599049 101.0 pass pass fail pass warn warn warn pass fail pass pass HLJY3DRX2_n02_BXPC3_R2minus_102722 HLJY3DRX2_n02_BXPC3_R2minus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 348050298.0 0.0 101.0 41.0 37.18815102300576 101.0 pass pass fail pass warn warn warn pass fail pass pass HLJY3DRX2_n02_BXPC3_R2plus_102722 HLJY3DRX2_n02_BXPC3_R2plus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 363927628.0 0.0 101.0 41.0 66.93103839639738 101.0 pass pass fail pass warn warn warn pass warn pass pass HLJY3DRX2_n02_BXPC3_R3minus_102722 HLJY3DRX2_n02_BXPC3_R3minus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 358753507.0 0.0 101.0 40.0 44.394248870507816 101.0 pass pass fail pass pass warn warn pass fail pass pass HLJY3DRX2_n02_BXPC3_R3plus_102722 HLJY3DRX2_n02_BXPC3_R3plus_102722.fastq.gz Conventional base calls Sanger / Illumina 1.9 364487381.0 0.0 101.0 41.0 39.86104345609556 101.0 pass pass fail pass fail pass warn pass fail warn pass HLJY3DRX2_n02_Gecko_v2_L1 HLJY3DRX2_n02_Gecko_v2_L1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3.0 0.0 101.0 39.0 100.0 101.0 pass pass warn fail fail pass pass pass fail fail HLJY3DRX2_n02_Gecko_v2_L2 HLJY3DRX2_n02_Gecko_v2_L2.fastq.gz Conventional base calls Sanger / Illumina 1.9 84.0 0.0 101.0 50.0 100.0 101.0 pass pass fail warn fail fail warn pass pass fail warn HLJY3DRX2_n02_HU2 HLJY3DRX2_n02_HU2.fastq.gz Conventional base calls Sanger / Illumina 1.9 38.0 0.0 101.0 51.0 52.63157894736842 101.0 pass pass fail pass fail fail fail pass warn fail pass HLJY3DRX2_n02_MS2 HLJY3DRX2_n02_MS2.fastq.gz Conventional base calls Sanger / Illumina 1.9 463.0 0.0 101.0 42.0 97.62419006479482 101.0 pass pass fail warn warn fail warn pass pass fail pass HLJY3DRX2_n02_undetermined HLJY3DRX2_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 120225564.0 0.0 101.0 45.0 40.990820234462575 101.0 pass pass fail pass fail fail warn pass fail fail pass