FastQCFastQC Report
Thu 3 Nov 2022
HLJY3DRX2_n02_Gecko_v2_L1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJY3DRX2_n02_Gecko_v2_L1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTCGGAGATGTGTATAAGAGACAGGTTGGCCAGGCTGGTCTCAAACT133.33333333333333No Hit
GAATATTCCAAAAAATATCAAGATAAAGAACTAATAAATAATACATCTTT133.33333333333333No Hit
CTATAGATTTGACCCTCAATATGCAACTCGTCACTCTCTTTCTGAGTGTC133.33333333333333No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)