FastQCFastQC Report
Thu 3 Nov 2022
HLJY3DRX2_n02_1A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJY3DRX2_n02_1A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32452318
Sequences flagged as poor quality0
Sequence length101
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTCTCTTATACACATCTGACGCTGCCGACGATCATCTCGAACTAAGCG1030470.31753355800346833No Hit
AGTATGAGGAGCGTTATGGAGTGGAAGTGAAATCACATGGCTAGGCCGGA340620.10496014491168243No Hit
CTGCTCGGAGATGTGTATAAGAGACAGCTGTCTCTTATACACATCTGACG325620.10033797893882343No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)