FastQCFastQC Report
Thu 3 Nov 2022
HLJY3DRX2_n01_HU2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJY3DRX2_n01_HU2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGACCTCCACGTTGATG12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGACATGCAGCTGCG12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGCCACCTGCCATTA12.631578947368421No Hit
GGAAGCAGGTGGATCAAAAGTGTGAGGCGAGTCCATCTGTCTCTTATACA12.631578947368421No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGGGCATGTACCAGCGAT12.631578947368421No Hit
CAACCGATCAATGTCTCCGAGCCCACGAGACGACAACGTATCGCGTTTGC12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGCCGTCCGCACCCG12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGTGCTGCTCCACCA12.631578947368421No Hit
CCCCAATTTGATAATTCCACATTATATGGAGGTCTCAAGTGAGCGCGTGC12.631578947368421No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGTTTGGCTCTTCCTCAT12.631578947368421No Hit
CCCGGAGGTAAGGTGTTTCTTTTTTTGTGTGCTCAAGTGTGGGATGGAGC12.631578947368421No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGCAGCACCTGCTACCCAC12.631578947368421No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGTTGTGGCCCTCCTGG12.631578947368421No Hit
ATCAGGGAGTTTCTGTTGGAGCTGATATAACAAATTATCCCAACCCTAAA12.631578947368421No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCAGCTCCACAGATTCTG12.631578947368421No Hit
GGTAGTTTGGGTTTCCACAAAAGCAGACCTCGAGATAGAGACTGGGGGAC12.631578947368421No Hit
GACCGCGCGGTTCTTGTGGAAAGGACGAAACACCGTGTATTCTACGTGAA12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGCCTCACCCAGCAA12.631578947368421No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCACAAGAACGAGAGCGTA12.631578947368421No Hit
TAACCGCAACAGCTTTATCAATACCATGAAAAATAACAACCACACCAGAA12.631578947368421No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGACTCACCTAGCCTGGCG12.631578947368421No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGATTATCTCAACTCAT12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGTTACAGGGGGCCT12.631578947368421No Hit
CGACCTATAAACATTCTGTGCCGCGTGTCTTTGTTCCTGAGCATGGCCCT12.631578947368421No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCGCTTGCGCGAGTCCGC12.631578947368421No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGGGCGCTCCGTGCGGTT12.631578947368421No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGTTCCTTAAAGATCA12.631578947368421No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGAGAGCTGAACGGTCCA12.631578947368421No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGTGATGCCCGGGTCCTGC12.631578947368421No Hit
AGAAGAAACTTAATTCCTCTCTCTGTGTGTGAGAAAAAAAAAATCCAGGC12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGAAGTCCACGAAGA12.631578947368421No Hit
TAAGTTGGATTAAGCACTCCGTGGACAGATTTGTCATTGTGAGCATTTTC12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGTTCAGGAGGGATA12.631578947368421No Hit
TCATTGATTCTCCTCTTCCAATTTACTCTAAACATCTTTGTAAATTGCAA12.631578947368421No Hit
GCGAGCGTTACCATCTTGTGGAAAGGACGAAACACCGTCCTGCAATGAGG12.631578947368421No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGCATGTTCTGCAACGAT12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGGACATCTATCTGC12.631578947368421No Hit
TCGATCGTTACCATCTTGTGGAAAGGACGAAACACCGCTGCGGTTCCCCG12.631578947368421No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)