FastQCFastQC Report
Thu 3 Nov 2022
HLJY3DRX2_n01_Gecko_v2_L2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJY3DRX2_n01_Gecko_v2_L2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84
Sequences flagged as poor quality0
Sequence length101
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCCAGGGGCAGGGGAGGAGGTGGCTCCCGGCGGGCTCGGAGAACTAAG11.1904761904761905No Hit
GCCGAGGAGAGGCTAGGCGAGAGAGGGCGGTGAGTGTGGGGCCTGCGGGC11.1904761904761905No Hit
CCAGCAGGAGAGGCCGCGGCTTCCCCAACCTTCCCACCCTAACCCAACGC11.1904761904761905No Hit
CTGACAGAGAGGGCGATACTGAACTTCAACAGCCTTAAAAGGAAGTCCTG11.1904761904761905No Hit
AGGGGGTAGCTGGGAAGCGACGCAGGACGTCGGTCCGTGCGTACGTGCTC11.1904761904761905No Hit
GCCACTGGGGACGCGTCTCGGGGCCCATGTCGCCAATCCGCGCGCCGCAG11.1904761904761905No Hit
GCCGGCTGTCACCCATTGTGACACTAGCGCCTTGGGCGCCCAGGCGCGGG11.1904761904761905No Hit
GCGATGGAGGGAGGATTGGTGCTGTGGGTGAAAGCGTATGATGGGGCTGT11.1904761904761905No Hit
CCTCCAGCAGGGGCTGCGCCTCCATGAATCCCGAGTTGTTTTTTTTTTTT11.1904761904761905No Hit
AGTATGAGGAGCGTTATGGAGTGGAAGTGAAATCACATGGCTAGGCCGGC11.1904761904761905No Hit
ACCATGCGTGGGTAGCGGTCGCGCCCGCTGGTAGCTGTGCGGCGGGAACA11.1904761904761905No Hit
CCAAACAGAGGGGCCATTTGAACATGTCCAGGCTCTCTGAGGAAGTCACA11.1904761904761905No Hit
GTCTTCTTGGAGCTTTTCTCTTTTAGCTTGCACTTTAGTTCCCTTCTCTT11.1904761904761905No Hit
CCCCCGGGCGCCGGAGCCTCCCGTCGGGCCGCGCGCTCCCGCCCCGGCGC11.1904761904761905No Hit
GCTCCAGTCTCCGAGATCGAGAGCTCGAATAGCCATCGGGTGCCGTACCC11.1904761904761905No Hit
CCCTCGCGGGGGATTCCCCGCGGGGGTGGGCGCCGGGAGGGGGGAGAGCG11.1904761904761905No Hit
AAAAATAAACTGCAATATGCCAAAACGAGAAATCATACATACAAAGAAAG11.1904761904761905No Hit
GCAAGCGGGTGGCGGAGGCGGCGCCGACGGGGACTGCTGAGGCGCGCAGA11.1904761904761905No Hit
CCCGAGGTCGGGAACAGACACTGAGGCAGCTCATGAAATGCGATTTGTCA11.1904761904761905No Hit
GGAATGGGAGGGGATGGGGTGGGTCAGGGCCATTGCTCCCTGCTGAGTCC11.1904761904761905No Hit
ATCCCTACCTGGACCCATGTGTCATTATATTCACAGGCCAAGCGGCCCCC11.1904761904761905No Hit
GCCTAACCCCTGTCTTTAGATTTACAGTCCAATGCTTCACTCAGCCATTT11.1904761904761905No Hit
CCCCACGAAAGCGGCTACTGAATCTCAGATTGCCCCACGATCCTGGCTCT11.1904761904761905No Hit
CCTCTGCTGGTGGCAAATTTTTTTGCTTCCTGGTAGCTAGCATGTACTAG11.1904761904761905No Hit
GACTAAGATGGTGCTACATTCAGGAACTGCAAGCATTTATGTGTGGCTAG11.1904761904761905No Hit
AGTAGAGCCAAGGCAGTGAGAGGATAGATGCCCGGAAGTGGCATACCTCC11.1904761904761905No Hit
CACCCATCCGGGTGAGGAACCCGGAGGGACCGCCTCCGGGCGGAGCCCGC11.1904761904761905No Hit
CCACCTCCCAGGCTCAAACAATCCTCCCACCTCAGCTACCCGAGTAGCTT11.1904761904761905No Hit
CCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGAGTTTTAAGCTGTG11.1904761904761905No Hit
AGGGACAGGGAGACTCACCAGTTCCCAAAGTACAAGAGGCCTCTGTAGGA11.1904761904761905No Hit
ATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATTTT11.1904761904761905No Hit
TAGAAGATGATCTGGAAAGATGTAAACCAAACTCTTGCCAGCCATATACT11.1904761904761905No Hit
CTGCAGCTGCTGGCCCGGGTGCTAAGCCCGTCACTGCCTGGGGCCGGCGG11.1904761904761905No Hit
AGACAAACTCATAGGAAAAAAAAAGTTAGAATGGTGTTAGTCAAGGACTG11.1904761904761905No Hit
ATACACGATCTCTTGTGGAAAGGACGAAACACCGGTTGTACGCCATCTTG11.1904761904761905No Hit
CTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGAAGCCCCCAT11.1904761904761905No Hit
CACATTGCAATTTGGACCAGGCACATTTCAGGGCTCAACAGCTTCATGTG11.1904761904761905No Hit
ATGCAAACTATTCATCTGACAAGGGATTAATAACTGAATATATAATGAGC11.1904761904761905No Hit
AGGCGAGCAGGGTCCCGCCTCCGTAATCCAGCGGGGGCCAGGGAGCCGCA11.1904761904761905No Hit
ACCATATGTGTGTATGGGACCAAGTCTTTAATGAAGGCTCAGGGATGACA11.1904761904761905No Hit
CTTTTATGGCTTGTAGGGTTTCTGCCAAGAGATCGATCTGCAGATTAACC11.1904761904761905No Hit
CAGAAATGTCTGGGTTTCTCTGAGGTAGGTAAGTGGGAAGAAGCTACTTG11.1904761904761905No Hit
CTCCTGGGCCAATGAAAGAAATGTGAGGAAAAGTCTAAGGGCGGTTGAGA11.1904761904761905No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCTCATGTCAATGTCTACTG11.1904761904761905No Hit
CCAGTGGGCGCCATCTCATTTCACTCCTACAGTACACAACCTGCCCCCGC11.1904761904761905No Hit
ATGCGGGGGAAATGTTGTTAGTAATGAGAAATCCTGCGAATAGGCTTCCG11.1904761904761905No Hit
GCCCAGAAGCGGGGAACCCCAACCAATGGGCGCGGGGAGTGGTAAGAAGC11.1904761904761905No Hit
CAATTAAACAGGCTTTGCGTGAGCAATAAAGCTGTTTTTTTCCACCTGGG11.1904761904761905No Hit
AGGAATGGGGTGGGTTTTGTATGTTCAAACTGTCATTTTATTTTTACGTT11.1904761904761905No Hit
CGCAGGGAGCTGGCTGCAGACACCCACTCAGTCCAGTCCTGTGGGCACAC11.1904761904761905No Hit
CACGCGCCCGCCTCCCTCCGGGGCGTTGCCGCCGCCGCGCCTCAGCAGCC11.1904761904761905No Hit
GCACTTTGGGAGGCCAAGTCAAGCAGATCACTTGAGCCCAGGAGTTCAAG11.1904761904761905No Hit
GTATCCTGGTAGGGTTCGTTCCCTCCCCAGCCCACTCAGGCCTCCTCCCG11.1904761904761905No Hit
GGTGGAAGCGGGTCGCACGGGGGAACCGAGTAGTAGTCGTGGAAGACTCG11.1904761904761905No Hit
GCTAGTCTACGCCTGTGGAGCCGATACTCAGCCCTCTGCGACCATGGCTG11.1904761904761905No Hit
GCTCGGGGTTCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCG11.1904761904761905No Hit
GCATATGAGTTTCTCTAGGGCAGTCTCTGGCTGGTTCCATTGTAGGATCT11.1904761904761905No Hit
CTTATTTCCGACCTTATCTTTGCATTGCTATAAAGGAACACCCTGGCCTG11.1904761904761905No Hit
GTGGCATTGTTCGTTACATGGTCCATCATAGAATTCTCACTGTGATATAT11.1904761904761905No Hit
GGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTCCGGGAATTGCATC11.1904761904761905No Hit
GACTTCGCAGCCTTACACTCTTCGTGGGCGGCGACCGCGGCCCCACTGAC11.1904761904761905No Hit
ACGCAAGGTGAGCCTTATTTTCGTGGAGGTTTCTGGGAGATGTAGTTTTT11.1904761904761905No Hit
CCCAAGTAGCTGGGAGTATAGGCGGGCACCATCACATCCAGCTAATTTTT11.1904761904761905No Hit
GCTAAAGACCAGCTTCTTTGGGAGAGAACAGACGCAGGGGCGGGCTGTCT11.1904761904761905No Hit
CCTCCATGCTTCCCTCCCAGTCTTGCCCAGCGCCCACTGATGAGGAAGGG11.1904761904761905No Hit
GATCGCGCGGTTCTTGTGGAAAGGACGAAACACCATCACAATCAGATGAT11.1904761904761905No Hit
ATAGAAACATTATTTGAACTTGCTTGGGGAAAAGTATACAGATTACATTT11.1904761904761905No Hit
CGCCCCTGGGGCCTCCGCGGCGGGAGCCTAGCGTCCGGCCCCCCCCCCCC11.1904761904761905No Hit
CGTGTGAGGGGGGCGGGGAGGGGGCGGGGCAAGGGCTGAGTGACAGCACG11.1904761904761905No Hit
GACTGGTAGGTAGGAAGGACGCTTCCTTACTCCCGCCGGGGAACGCGAGA11.1904761904761905No Hit
GCTCTTTCTCCCGGTTTGTTCCCGACGGTGCTCGCTCGTGGGCCCGCCCT11.1904761904761905No Hit
GCCCTCTCACCCCGCTGCCTCTAGGTTCTGGGAAGATGGCGAAGGTCTCA11.1904761904761905No Hit
ACCACCCATTGGCTCAAAGGAAGCCCCGCCCCGTACAGCCACGGTAACTG11.1904761904761905No Hit
CATAAACTGTGGGGGGTGTCGTTGGGGGTTGGGTGGTACGGGGTAGGGGG11.1904761904761905No Hit
CGGCTACGCGGGTTTCCCCCACTCGCTCCTCTCCAGCCTCCCCTTCCGGG11.1904761904761905No Hit
CATGTTGGCGGGTGCTGCTTTGATCACTGTTTGCACTCAATCTAGTCTTT11.1904761904761905No Hit
CTTTGTGAAGTAGGCCTTATTTCTCTTGTCCTTTCGTACAGGGAGGAAGT11.1904761904761905No Hit
CCTTTGATTCCGCCCCCTATTCCTCCACTCAGATTCCACACTTGACAACA11.1904761904761905No Hit
GCTGCTATGGGGCCGGGCGGCCGTGTGGCGCGGCTGCTCGCCCCACGACT11.1904761904761905No Hit
CCCTCCCTCCCTGCTTCCGAGAGGCATCTCCAAACACCCACGCGCCGTCT11.1904761904761905No Hit
GGTCGGCCGCCCCGGGTGCCGCGCGGTGCCGCCGGCGGCGGTGAGGCCCC11.1904761904761905No Hit
GCCGCACAAGGGCAGACGCGCTGCGGTGCGGGGCTCGGGCCGGGGCGCTC11.1904761904761905No Hit
CCAACTCCCGCCTCCCGCCATCCGGCGCTGCCGCGTCTGACTGGCTGTCG11.1904761904761905No Hit
ACCCTCAGCCATGGCTTAAGCCAGCGCCGCGGCCGGACCGTTACTCTGAC11.1904761904761905No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)