FastQCFastQC Report
Thu 3 Nov 2022
HLJY3DRX2_n01_6C.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJY3DRX2_n01_6C.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2466361
Sequences flagged as poor quality0
Sequence length101
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCT2419649.810567066216178No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCTCGT1810927.342477439434049No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCTCGTA1296865.258192130024762No Hit
CAACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCG880383.569550442940024No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCGCGT875203.5485478403202126No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCGCGTA674872.736298538616204No Hit
CAACCGAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAG411751.6694636348855663No Hit
CAACCGAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGA259231.0510626789833282No Hit
CAACCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATC250131.0141662149214976No Hit
CAACCGAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGC242100.9816081263043002No Hit
CAACCGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACAT210230.8523894109580876No Hit
AACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCTC198240.8037752786392584No Hit
CACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCTCG176090.7139668523788691No Hit
CAACCGAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCA139600.5660160860474196No Hit
CAACCGAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGG114940.4660307229963497No Hit
CACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCTC110160.44664994297266297No Hit
AACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCGC91160.3696133696567534No Hit
CAACCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAG87000.3527464146570595No Hit
CAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCTC80640.3269594353786814No Hit
CACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCGCG78940.32006668934515264No Hit
CAACCGAAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCG69650.28239985955016317No Hit
CAACCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGC68220.27660184376901836No Hit
CAACCGATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCA54840.22235187792865682No Hit
CACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCGC53030.21501313068119388No Hit
CAACCGATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCAC50680.20548492292896295No Hit
CAACCGAAAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACC45540.18464450256876427No Hit
CAACCGATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGC40620.164696084636434No Hit
CAACCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACAT39880.16169571283360384No Hit
CTGTCTCTTATACACATCTCCGAGCCCCTGTCTCTTATACACATCTCCGA38800.15731679182406794No Hit
CAACCGATGTGGCACCTGTCTCTTATACACATCTCCGAGCCCACGAGACC36870.14949149779776766No Hit
CAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCGC35510.14397730097094463No Hit
CAACCAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCA34630.14040929125947094No Hit
TAACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCT33860.13728728276193145No Hit
CAACCGAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCAC32830.1331110895769111No Hit
CAACCGATGTGGCACCGAGTCGGTGCTTTGACACGATGCTTCTCCTGTCT32190.13051617342311203No Hit
TAACCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATC32070.1300296266442747No Hit
CAACCGATACACATCTCCGAGCCCACGAGACCGGAGCACATCTCGTATGC31250.12670489032221968No Hit
CAACCAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGA29660.12025814550262512No Hit
CAACCGATAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGA29470.11948777976946603No Hit
CACCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCACATCT28370.11502776763012389No Hit
CAACCGATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGCA27870.11300048938496837No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)