FastQCFastQC Report
Fri 20 May 2022
HLJNGAFX3_n02_ADARcd_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJNGAFX3_n02_ADARcd_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50170782
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTGCGCAAATAGCGCTCCTCATCCGGCATGGCCATGGCGCCGCAGTAT806640.160778837371919No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG584440.11649011171482239No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT516430.1029344131012349No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)