FastQCFastQC Report
Tue 17 May 2022
HLJNGAFX3_n02_ADARcd.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJNGAFX3_n02_ADARcd.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17061
Sequences flagged as poor quality0
Sequence length151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2771.6235859562745443No Hit
CTCCGAAACCACGGTACAATCCAACGATGCCGTCGCTCTTGAAGATCTTG250.14653302854463396No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAAGCTAGAAGTGTAGA220.1289490651192779No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)