FastQCFastQC Report
Wed 30 Nov 2022
HLJKYDRX2_n02_DO11_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLJKYDRX2_n02_DO11_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47618600
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCAAACACACCCAA23755854.988775394488709No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCCAACACACCCAA17582253.692307207687752No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCCAACACACCAAA6930421.4554018807776794No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCAACACACCCAACACACCCAAC4475270.9398155342660222No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCAACACACCCAAC2532420.531813199044071No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2390970.5021084198191462No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCCAAACACACCCA2117630.44470648024091425No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGT2104520.441953354361531No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACACCCAACACACCC2039490.42829692599110436No Hit
TGTGTTGGGTGTGTTGGGTGTGTTGGGTGTGTTGGGTGTGTTGGGTGTGT1696690.3563082492975434No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCGACACACCCAACACACCCAA1636100.3435842296917591No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCTAACACACCCAACACACCCAA1594330.33481244723700404No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTGGGTGTGTTGGGTGTGT1541200.32365504235739817No Hit
TGTGTTGGGTGTGTTTGGTACCAAACACACCCAACACACCAAACACACCC1516460.31845959352017905No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCACACACACCCAACACACCCA1473610.309461008933484No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAGCACACCCAACACACCCAA1458870.30636557983645046No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACACCCAACACACCA1401550.29432826668570683No Hit
TGTGTTGGGTGTGTTTGGTACCAAACACACCCAACACACCCAACACACCC1364470.2865413934890988No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCAACACACCAAAC1298930.2727778641119226No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACACAACACACCCAACACACCCAA1276820.2681347204663724No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCAACACACCAACACACCCAACA1232980.25892823392539893No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCAAACACACCAAA1163960.24443389767863816No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACACCAAACACACCC1157850.24315078561738482No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCAACACACCAAACACACCCAAC1125000.23625222077087524No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTGGGTGTGTTTGGCCAAA1120150.23523371119688524No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCCAACACACCAAC1081370.22708983464444563No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAAACACACCAACACACCCAA1022360.21469761815761068No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCAAAAACACCCAA1016800.2135300071820675No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACGCACCCAACACACCCAA980550.20591743562389486No Hit
TGTGTTGGGTGTGTTTGGTGTGTTGGGTGTGTTGGGTGTGTTTGGTGTGT979560.2057095336696165No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAATACACCCAACACACCCAA857620.1801018929577938No Hit
TGTGTTGGGTGTGTTTGGTACCAAACACACCAACACACCCAACACACCCA840560.17651925928103723No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCAACACACACCCAACACACCCA837560.17588925335898156No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCAACACACCCAACACACCAAAC834800.17530964791069037No Hit
TGTTGGGTGTGTTTGGCCAAACACACCCAACACAAGATCGGAAGAGCGTC745470.15655017157161277No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAAACACACCCAACACACCCA692750.1454788675013545No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCGAACACACCCAACACACCCAA692740.14547676748161434No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCACACACCCAACACACCCAAC658190.13822119927927323No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACCAAACACACCAAC653710.13728039043567009No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACAAGATCGGAAGAGCGTC640560.13451886447732608No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCTACACACCCAACACACCCAA614430.12903151289622122No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACTCAACACACCCAACACACCCAA608140.1277106004796445No Hit
TGTGTTGGGTGTGTTTGGCACCAAACACACCCAACACACCAAACACACCC582720.12237235030009282No Hit
TGTGTTGGGTGTGTTTGGGTTGTCAGAAAAAAACCACCAAACACACCCAA580880.12198594666789866No Hit
TGTGTTGGGTGTGTTTGGTACCAAACACACCCAACACACCCAACACACCA573070.12034583125081376No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAACACACACACCCAACACAC539690.11333596535807436No Hit
TGTGTTGGGTGTGTTTGGACCAAACACACCCAACACACCAAACACACCCA533010.11193315217163041No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCCAAACACACCCAACACACCAA529220.11113724469010008No Hit
TGTGTTGGGTGTGTTTGGCCAAACACACCAAACACATCCAACACACCCAA477330.10024024225827723No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)