FastQCFastQC Report
Thu 18 Nov 2021
HLGLLBGXK_n02_911.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLGLLBGXK_n02_911.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17007359
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTAGCGTTGATTCAGCTAACGAGCGAGATTATCGCCAATTATTTACTT281560.1655518649309396No Hit
CTCCTACTCTCGCCCTTGATCGACAGAAACCCTCTAGGTAGACGCCTTCG259900.15281620150430175No Hit
GTCTACACCCCCGCAGGAACTATACAAGACTAGACCAAAGTGAAGCTCTA217830.1280798506105504No Hit
CATCAGAGGCACGCCATTCGACTGAGTGACCTATCAGCTTGTACTTAGGG206420.12137099005201218No Hit
GTGGTAGTATAGCCAGTGAACGCGACATGAATCCTGCTCAGTGCTGTGTC203750.11980108140246819No Hit
GCTCTGGGCTGCACGCGTGCTACAATGTTAGGATCAATAGGACTGCGAGC203240.11950121121098226No Hit
GTATTAGGGATCGTGAGCTGGGTTTAGACCGTCGTGAGCCAGGTTTGTTT199550.1173315621784664No Hit
GTCTTAGATGTGCGAAATTACAGCACGCGCTTATTTATAATTTGGCATTA199230.11714340833282816No Hit
GTCTTAAGGGGGTGGTATGTCCCATCCAAGGCTAAATAACGTGAGGAGAC198450.11668478333408495No Hit
CCTTAAGACACTACTCTCAAAGTATCCGACTCTCCCCGGTCCATCGTAAG192980.11346852853520643No Hit
GAGTAGGAGTATCCAACAGGATTAGAGACCCTGGTAGTTCCTACCTTAAA186640.10974073046849896No Hit
GGTCTAAGTCAGATGGAATGCTGCGCGATTCAGAGTAAAAGCCTCGTATG177540.10439010548316174No Hit
ATCCCAGACGGCGTAGCTGCGCGACATACCGTTTCCGATAATCGCTAACC176460.1037550862541327No Hit
GTCCTATTCCTTGTGATAGGTAAGCATAATTCCAAACAGGGTAGTGGTTT176420.10373156702342791No Hit
CATTACACCTTCGCAAAAATGTCCACATCCCCCTACTCTCAGTTCAATAG172440.10139140356830241No Hit
GTATGAAGTCTTTGTTTTCTTCCGAAAACAAGCTCAATGAGAGCCATCGG172230.1012679276071023No Hit
CCTCTAGATAACGTGATTTAATCACTTTCTGCTCGTAAGCATCCGGTGAT171050.10057411030131133No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)