FastQCFastQC Report
Thu 18 Nov 2021
HLGLLBGXK_n02_908.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLGLLBGXK_n02_908.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59084302
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAGAGGCACGCCATTCGACTGAGTGACCTATCAGCTTGTACTTAGGG739310.12512799084941376No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG667390.11295555289795925No Hit
GTGGTAGTATAGCCAGTGAACGCGACATGAATCCTGCTCAGTGCTGTGTC613610.1038533043853171No Hit
GGTCATTACCTCCTCCGAAAGTCTCGAGTGGGAAAGTTTCGCGCCTGCTG610090.10325754546444503No Hit
GTCTACACCCCCGCAGGAACTATACAAGACTAGACCAAAGTGAAGCTCTA607160.10276164386269639No Hit
GGTCTAAGTCAGATGGAATGCTGCGCGATTCAGAGTAAAAGCCTCGTATG601270.10176476316839624No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)