FastQCFastQC Report
Thu 18 Nov 2021
HLGLLBGXK_n01_911.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLGLLBGXK_n01_911.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17007359
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTAGCGTTGATTCAGCTAACGAGCGAGATTATCGCCAATTATTTACTT273740.1609538553281553No Hit
CTCCTACTCTCGCCCTTGATCGACAGAAACCCTCTAGGTAGACGCCTTCG258980.15227525919809184No Hit
GTCTACACCCCCGCAGGAACTATACAAGACTAGACCAAAGTGAAGCTCTA211720.12448728812039542No Hit
ATCCCAGACGGCGTAGCTGCGCGACATACCGTTTCCGATAATCGCTAACC205140.12061837466945927No Hit
CCTTAAGACACTACTCTCAAAGTATCCGACTCTCCCCGGTCCATCGTAAG203340.11956000928774421No Hit
CATCAGAGGCACGCCATTCGACTGAGTGACCTATCAGCTTGTACTTAGGG199710.11742563910128552No Hit
GCTCTGGGCTGCACGCGTGCTACAATGTTAGGATCAATAGGACTGCGAGC194070.11410942757191167No Hit
GAGTAGGAGTATCCAACAGGATTAGAGACCCTGGTAGTTCCTACCTTAAA192130.11296874488272987No Hit
GTATTAGGGATCGTGAGCTGGGTTTAGACCGTCGTGAGCCAGGTTTGTTT188900.11106956700331898No Hit
GTCTTAGATGTGCGAAATTACAGCACGCGCTTATTTATAATTTGGCATTA176440.1037433266387803No Hit
ACGCTAGACAGGTCAACCCACGCACCACCAACGGCCATGCACCACCAAAA176240.1036257304852564No Hit
GTCTTAAGGGGGTGGTATGTCCCATCCAAGGCTAAATAACGTGAGGAGAC174160.10240273048860792No Hit
GTGGTAGTATAGCCAGTGAACGCGACATGAATCCTGCTCAGTGCTGTGTC171670.10093865837723541No Hit
AGATAGATCTACCCCCGATGGCTCTCATTGAGCTTGTTTTCGGAAGAAAA171460.1008151824160353No Hit
GTATGAAGTCTTTGTTTTCTTCCGAAAACAAGCTCAATGAGAGCCATCGG171110.1006093891473685No Hit
GAATAGGACTAGATAGAAAGTTTGGCTGGGGCGGCACACCTTCGAAAGAG170780.10041535549405409No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)