FastQCFastQC Report
Fri 28 Oct 2022
HLGK3BGXM_n02_dmd-3_24_B.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLGK3BGXM_n02_dmd-3_24_B.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51185139
Sequences flagged as poor quality0
Sequence length36
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGAC5308171.03705296179815No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2926400.5717284464148862No Hit
CGTTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA2888260.5642770648722865No Hit
CGCTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA2687090.5249746415653965No Hit
CGTGTTTGAGCGCGCTGCATACTTGGATCGTCGGAC2499900.4884034797678287No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2263170.4421537274715616No Hit
CCGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA2241600.43793961368357326No Hit
CGTGCATGAGCGCGCTGCATACTTGGATCGTCGGAC2033590.39730086500302364No Hit
TGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGAC1954510.3818510681391331No Hit
CGCGCTTGAGCGCGCTGCATACTTGGATCGTCGGAC1953270.38160881032285565No Hit
CTGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1695890.33132468390874154No Hit
CGTGGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1591990.31102582333516765No Hit
CGTCGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1477730.2887029377804366No Hit
TCGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1471110.2874095936322455No Hit
ACGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1284910.25103184734928624No Hit
CGATGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1189330.2323584585752517No Hit
CAGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA1103540.21559773433456925No Hit
GCGCGCTGCATACTTGGATCGTCGGACTGTAGAACT1055810.20627276209995246No Hit
TGTGTTTGAGCGCGCTGCATACTTGGATCGTCGGAC891010.1740759168398468No Hit
CGTAGCTTGAGCGCGCTGCATACTTGGATCGTCGGA869750.16992236750592785No Hit
CGTGTCTTGAGCGCGCTGCATACTTGGATCGTCGGA859020.16782605591830083No Hit
GCGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA819830.16016953670869194No Hit
CGGCGCTTGAGCGCGCTGCATACTTGGATCGTCGGA801200.15652980838832928No Hit
CGTGATTGAGCGCGCTGCATACTTGGATCGTCGGAC733320.14326814663920323No Hit
CGTGACTTGAGCGCGCTGCATACTTGGATCGTCGGA706170.13796387267796614No Hit
TGTTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA634790.12401841870547621No Hit
TTGTGCTTGAGCGCGCTGCATACTTGGATCGTCGGA581670.11364040644687905No Hit
CGTGCCTGAGCGCGCTGCATACTTGGATCGTCGGAC561110.10962361555763285No Hit
CGTGCGTGAGCGCGCTGCATACTTGGATCGTCGGAC534170.10436036912979763No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)