FastQCFastQC Report
Fri 28 Oct 2022
HLGK3BGXM_n01_dmd-3_24_B.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHLGK3BGXM_n01_dmd-3_24_B.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51185139
Sequences flagged as poor quality0
Sequence length15
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTATGCAGCGCG743568514.527038795381605No Hit
AAGTATGCAGCGCGC4943650.9658369785808338No Hit
CAAAAAAAAAAAAAA4166660.814037058686116No Hit
AAAAAAAAAAAAAAA4085870.7982531804788106No Hit
CCAAGTATGCAGCGC2278450.4451389689495617No Hit
CCAAAAAAAAAAAAA1461130.285459808949625No Hit
CAAGTATGCAGCGCC1408080.27509547253549516No Hit
CAAGTATGCAGCCGC1395620.27266117222031966No Hit
CAAGTATGCAGCGGC1078020.21061191218021308No Hit
CAAGTATGCAGCGCA989860.19338816291970995No Hit
TAAAAAAAAAAAAAA976790.19083468738846252No Hit
AAAGTATGCAGCGCG814210.1590715617671762No Hit
CAAGTATGCAGGCGC625430.12218976293099448No Hit
CAAGTATGCAGCGCT620200.12116798198008215No Hit
GAAAAAAAAAAAAAA552370.10791608869128987No Hit
ACAGTATGCAGCGCG519270.10144936795033418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)